Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm8309-201ENSMUST00000206627 1448 ntBASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Paupar-201ENSMUST00000194826 3482 ntBASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Gm42928-201ENSMUST00000197338 3339 ntBASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-1Q5R1I8 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-1Q5R1I8 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-1Q5R1I8 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-1Q5R1I8 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-1Q5R1I8 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Trav3-1Q5R1I8 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trav3-1Q5R1I8 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-1Q5R1I8 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-1Q5R1I8 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trav3-1Q5R1I8 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Trav3-1Q5R1I8 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-1Q5R1I8 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-1Q5R1I8 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-1Q5R1I8 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-1Q5R1I8 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC10.5□□□□□ -0.73
Trav3-1Q5R1I8 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-1Q5R1I8 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC10.5□□□□□ -0.73
Trav3-1Q5R1I8 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-1Q5R1I8 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC10.5□□□□□ -0.73
Trav3-1Q5R1I8 Gm43759-201ENSMUST00000196925 1261 ntBASIC10.5□□□□□ -0.73
Trav3-1Q5R1I8 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC10.5□□□□□ -0.73
Trav3-1Q5R1I8 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Trav3-1Q5R1I8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-1Q5R1I8 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-1Q5R1I8 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-1Q5R1I8 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trav3-1Q5R1I8 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-1Q5R1I8 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-1Q5R1I8 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-1Q5R1I8 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-1Q5R1I8 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-1Q5R1I8 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC10.5□□□□□ -0.73
Trav3-1Q5R1I8 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-1Q5R1I8 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-1Q5R1I8 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Trav3-1Q5R1I8 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-1Q5R1I8 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-1Q5R1I8 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-1Q5R1I8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-1Q5R1I8 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-1Q5R1I8 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-1Q5R1I8 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC10.49□□□□□ -0.73
Trav3-1Q5R1I8 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-1Q5R1I8 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.49□□□□□ -0.73
Trav3-1Q5R1I8 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC10.49□□□□□ -0.73
Trav3-1Q5R1I8 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-1Q5R1I8 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-1Q5R1I8 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-1Q5R1I8 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-1Q5R1I8 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-1Q5R1I8 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-1Q5R1I8 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-1Q5R1I8 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC10.49□□□□□ -0.73
Trav3-1Q5R1I8 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-1Q5R1I8 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-1Q5R1I8 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-1Q5R1I8 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3-1Q5R1I8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Trav3-1Q5R1I8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC10.49□□□□□ -0.73
Trav3-1Q5R1I8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms