Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav6d-4Q5R1I0 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-4Q5R1I0 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-4Q5R1I0 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.03□□□□□ -0.32
Trav6d-4Q5R1I0 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-4Q5R1I0 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-4Q5R1I0 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-4Q5R1I0 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav6d-4Q5R1I0 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav6d-4Q5R1I0 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-4Q5R1I0 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-4Q5R1I0 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-4Q5R1I0 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-4Q5R1I0 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-4Q5R1I0 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-4Q5R1I0 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-4Q5R1I0 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-4Q5R1I0 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.03□□□□□ -0.32
Trav6d-4Q5R1I0 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.03□□□□□ -0.32
Trav6d-4Q5R1I0 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav6d-4Q5R1I0 Gm18489-201ENSMUST00000172565 551 ntBASIC13.03□□□□□ -0.32
Trav6d-4Q5R1I0 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-4Q5R1I0 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.03□□□□□ -0.32
Trav6d-4Q5R1I0 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav6d-4Q5R1I0 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-4Q5R1I0 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav6d-4Q5R1I0 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav6d-4Q5R1I0 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-4Q5R1I0 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-4Q5R1I0 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav6d-4Q5R1I0 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-4Q5R1I0 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-4Q5R1I0 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.03□□□□□ -0.32
Trav6d-4Q5R1I0 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-4Q5R1I0 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-4Q5R1I0 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav6d-4Q5R1I0 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.03□□□□□ -0.32
Trav6d-4Q5R1I0 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6d-4Q5R1I0 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6d-4Q5R1I0 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6d-4Q5R1I0 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.02□□□□□ -0.32
Trav6d-4Q5R1I0 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6d-4Q5R1I0 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6d-4Q5R1I0 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6d-4Q5R1I0 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.02□□□□□ -0.32
Trav6d-4Q5R1I0 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-4Q5R1I0 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-4Q5R1I0 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-4Q5R1I0 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.02□□□□□ -0.33
Trav6d-4Q5R1I0 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.33
Trav6d-4Q5R1I0 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trav6d-4Q5R1I0 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav6d-4Q5R1I0 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-4Q5R1I0 Gm9682-201ENSMUST00000197505 556 ntBASIC13.02□□□□□ -0.33
Trav6d-4Q5R1I0 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.02□□□□□ -0.33
Trav6d-4Q5R1I0 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav6d-4Q5R1I0 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-4Q5R1I0 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-4Q5R1I0 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-4Q5R1I0 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-4Q5R1I0 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-4Q5R1I0 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-4Q5R1I0 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-4Q5R1I0 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-4Q5R1I0 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-4Q5R1I0 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav6d-4Q5R1I0 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-4Q5R1I0 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-4Q5R1I0 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-4Q5R1I0 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav6d-4Q5R1I0 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-4Q5R1I0 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-4Q5R1I0 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-4Q5R1I0 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-4Q5R1I0 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav6d-4Q5R1I0 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-4Q5R1I0 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-4Q5R1I0 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-4Q5R1I0 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-4Q5R1I0 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-4Q5R1I0 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav6d-4Q5R1I0 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Trav6d-4Q5R1I0 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-4Q5R1I0 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.01□□□□□ -0.33
Trav6d-4Q5R1I0 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav6d-4Q5R1I0 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.01□□□□□ -0.33
Trav6d-4Q5R1I0 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.01□□□□□ -0.33
Trav6d-4Q5R1I0 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-4Q5R1I0 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-4Q5R1I0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-4Q5R1I0 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-4Q5R1I0 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-4Q5R1I0 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-4Q5R1I0 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-4Q5R1I0 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms