Protein–RNA interactions for Protein: Q5R1A3

Trdv4, T cell receptor delta variable 4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv4Q5R1A3 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC12.83□□□□□ -0.36
Trdv4Q5R1A3 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Trdv4Q5R1A3 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.83□□□□□ -0.36
Trdv4Q5R1A3 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdv4Q5R1A3 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdv4Q5R1A3 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trdv4Q5R1A3 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trdv4Q5R1A3 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trdv4Q5R1A3 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdv4Q5R1A3 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.83□□□□□ -0.36
Trdv4Q5R1A3 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdv4Q5R1A3 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdv4Q5R1A3 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trdv4Q5R1A3 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdv4Q5R1A3 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdv4Q5R1A3 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdv4Q5R1A3 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trdv4Q5R1A3 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.83□□□□□ -0.36
Trdv4Q5R1A3 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdv4Q5R1A3 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdv4Q5R1A3 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Trdv4Q5R1A3 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.83□□□□□ -0.36
Trdv4Q5R1A3 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trdv4Q5R1A3 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdv4Q5R1A3 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdv4Q5R1A3 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.83□□□□□ -0.36
Trdv4Q5R1A3 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdv4Q5R1A3 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trdv4Q5R1A3 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trdv4Q5R1A3 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdv4Q5R1A3 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trdv4Q5R1A3 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trdv4Q5R1A3 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trdv4Q5R1A3 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Trdv4Q5R1A3 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Trdv4Q5R1A3 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdv4Q5R1A3 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdv4Q5R1A3 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Trdv4Q5R1A3 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdv4Q5R1A3 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trdv4Q5R1A3 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdv4Q5R1A3 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.82□□□□□ -0.36
Trdv4Q5R1A3 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdv4Q5R1A3 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdv4Q5R1A3 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.82□□□□□ -0.36
Trdv4Q5R1A3 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trdv4Q5R1A3 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdv4Q5R1A3 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdv4Q5R1A3 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdv4Q5R1A3 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdv4Q5R1A3 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trdv4Q5R1A3 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdv4Q5R1A3 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trdv4Q5R1A3 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.82□□□□□ -0.36
Trdv4Q5R1A3 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trdv4Q5R1A3 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdv4Q5R1A3 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Trdv4Q5R1A3 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdv4Q5R1A3 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdv4Q5R1A3 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Trdv4Q5R1A3 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdv4Q5R1A3 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdv4Q5R1A3 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.81□□□□□ -0.36
Trdv4Q5R1A3 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdv4Q5R1A3 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdv4Q5R1A3 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trdv4Q5R1A3 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trdv4Q5R1A3 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trdv4Q5R1A3 Gm4459-201ENSMUST00000118750 468 ntBASIC12.81□□□□□ -0.36
Trdv4Q5R1A3 Gm12644-201ENSMUST00000119935 606 ntBASIC12.81□□□□□ -0.36
Trdv4Q5R1A3 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC12.81□□□□□ -0.36
Trdv4Q5R1A3 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.81□□□□□ -0.36
Trdv4Q5R1A3 Gm12497-201ENSMUST00000138778 237 ntBASIC12.81□□□□□ -0.36
Trdv4Q5R1A3 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.81□□□□□ -0.36
Trdv4Q5R1A3 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.81□□□□□ -0.36
Trdv4Q5R1A3 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.81□□□□□ -0.36
Trdv4Q5R1A3 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdv4Q5R1A3 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdv4Q5R1A3 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdv4Q5R1A3 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trdv4Q5R1A3 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdv4Q5R1A3 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdv4Q5R1A3 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdv4Q5R1A3 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdv4Q5R1A3 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trdv4Q5R1A3 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdv4Q5R1A3 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdv4Q5R1A3 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdv4Q5R1A3 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdv4Q5R1A3 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdv4Q5R1A3 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdv4Q5R1A3 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Trdv4Q5R1A3 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdv4Q5R1A3 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trdv4Q5R1A3 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trdv4Q5R1A3 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Trdv4Q5R1A3 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trdv4Q5R1A3 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trdv4Q5R1A3 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trdv4Q5R1A3 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms