Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc27Q3V036 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc27Q3V036 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc27Q3V036 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Ccdc27Q3V036 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc27Q3V036 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc27Q3V036 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC19.82■□□□□ 0.76
Ccdc27Q3V036 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc27Q3V036 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc27Q3V036 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc27Q3V036 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc27Q3V036 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc27Q3V036 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc27Q3V036 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
Ccdc27Q3V036 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Ccdc27Q3V036 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Ccdc27Q3V036 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc27Q3V036 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc27Q3V036 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc27Q3V036 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc27Q3V036 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc27Q3V036 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc27Q3V036 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc27Q3V036 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc27Q3V036 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC19.82■□□□□ 0.76
Ccdc27Q3V036 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc27Q3V036 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc27Q3V036 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc27Q3V036 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc27Q3V036 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
Ccdc27Q3V036 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc27Q3V036 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc27Q3V036 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc27Q3V036 Gm6858-201ENSMUST00000208582 1468 ntBASIC19.81■□□□□ 0.76
Ccdc27Q3V036 Gm37728-201ENSMUST00000195025 2292 ntBASIC19.81■□□□□ 0.76
Ccdc27Q3V036 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
Ccdc27Q3V036 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc27Q3V036 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc27Q3V036 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc27Q3V036 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc27Q3V036 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Ccdc27Q3V036 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc27Q3V036 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Ccdc27Q3V036 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc27Q3V036 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc27Q3V036 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc27Q3V036 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC19.81■□□□□ 0.76
Ccdc27Q3V036 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc27Q3V036 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc27Q3V036 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc27Q3V036 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.81■□□□□ 0.76
Ccdc27Q3V036 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc27Q3V036 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc27Q3V036 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc27Q3V036 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc27Q3V036 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc27Q3V036 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc27Q3V036 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc27Q3V036 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc27Q3V036 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Ccdc27Q3V036 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc27Q3V036 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc27Q3V036 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc27Q3V036 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Ccdc27Q3V036 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc27Q3V036 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc27Q3V036 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc27Q3V036 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc27Q3V036 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc27Q3V036 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc27Q3V036 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc27Q3V036 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ccdc27Q3V036 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC19.79■□□□□ 0.76
Ccdc27Q3V036 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ccdc27Q3V036 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.79■□□□□ 0.76
Ccdc27Q3V036 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc27Q3V036 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc27Q3V036 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.79■□□□□ 0.76
Ccdc27Q3V036 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc27Q3V036 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.79■□□□□ 0.76
Ccdc27Q3V036 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc27Q3V036 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc27Q3V036 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc27Q3V036 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc27Q3V036 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc27Q3V036 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ccdc27Q3V036 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ccdc27Q3V036 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc27Q3V036 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc27Q3V036 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc27Q3V036 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc27Q3V036 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Ccdc27Q3V036 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC19.79■□□□□ 0.76
Ccdc27Q3V036 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.78■□□□□ 0.76
Ccdc27Q3V036 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc27Q3V036 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Ccdc27Q3V036 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Ccdc27Q3V036 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.78■□□□□ 0.76
Ccdc27Q3V036 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc27Q3V036 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms