Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Q3KNL4 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Q3KNL4 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Q3KNL4 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.28■□□□□ 0.04
Q3KNL4 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q3KNL4 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q3KNL4 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q3KNL4 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Q3KNL4 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q3KNL4 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.28■□□□□ 0.04
Q3KNL4 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Q3KNL4 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q3KNL4 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Q3KNL4 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q3KNL4 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q3KNL4 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Q3KNL4 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.28■□□□□ 0.04
Q3KNL4 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q3KNL4 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q3KNL4 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q3KNL4 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Q3KNL4 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q3KNL4 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q3KNL4 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Q3KNL4 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Q3KNL4 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Q3KNL4 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Q3KNL4 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.27■□□□□ 0.04
Q3KNL4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Q3KNL4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Q3KNL4 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Q3KNL4 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Q3KNL4 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Q3KNL4 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Q3KNL4 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Q3KNL4 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Q3KNL4 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.27■□□□□ 0.04
Q3KNL4 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.27■□□□□ 0.04
Q3KNL4 Gm17808-201ENSMUST00000200859 894 ntBASIC15.27■□□□□ 0.04
Q3KNL4 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.27■□□□□ 0.04
Q3KNL4 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Q3KNL4 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Q3KNL4 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Q3KNL4 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Q3KNL4 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
Q3KNL4 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Q3KNL4 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Q3KNL4 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Q3KNL4 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Q3KNL4 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.03
Q3KNL4 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
Q3KNL4 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Q3KNL4 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.26■□□□□ 0.03
Q3KNL4 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Q3KNL4 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Q3KNL4 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Q3KNL4 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.26■□□□□ 0.03
Q3KNL4 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Q3KNL4 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.26■□□□□ 0.03
Q3KNL4 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Q3KNL4 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Q3KNL4 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Q3KNL4 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Q3KNL4 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Q3KNL4 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.26■□□□□ 0.03
Q3KNL4 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Q3KNL4 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Q3KNL4 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.26■□□□□ 0.03
Q3KNL4 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Q3KNL4 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Q3KNL4 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.26■□□□□ 0.03
Q3KNL4 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Q3KNL4 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.26■□□□□ 0.03
Q3KNL4 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Q3KNL4 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Q3KNL4 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Q3KNL4 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Q3KNL4 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Q3KNL4 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Q3KNL4 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Q3KNL4 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Q3KNL4 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Q3KNL4 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Q3KNL4 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Q3KNL4 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Q3KNL4 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Q3KNL4 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Q3KNL4 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Q3KNL4 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Q3KNL4 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Q3KNL4 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Q3KNL4 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Q3KNL4 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Q3KNL4 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Q3KNL4 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.25■□□□□ 0.03
Q3KNL4 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Q3KNL4 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Q3KNL4 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Q3KNL4 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Q3KNL4 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms