Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nhej1Q3KNJ2 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Nhej1Q3KNJ2 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Nhej1Q3KNJ2 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nhej1Q3KNJ2 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nhej1Q3KNJ2 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nhej1Q3KNJ2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nhej1Q3KNJ2 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nhej1Q3KNJ2 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nhej1Q3KNJ2 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nhej1Q3KNJ2 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Nhej1Q3KNJ2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nhej1Q3KNJ2 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.56■□□□□ 0.24
Nhej1Q3KNJ2 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.56■□□□□ 0.24
Nhej1Q3KNJ2 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nhej1Q3KNJ2 Gm45328-201ENSMUST00000210942 917 ntBASIC16.56■□□□□ 0.24
Nhej1Q3KNJ2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.56■□□□□ 0.24
Nhej1Q3KNJ2 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Nhej1Q3KNJ2 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nhej1Q3KNJ2 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nhej1Q3KNJ2 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nhej1Q3KNJ2 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nhej1Q3KNJ2 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nhej1Q3KNJ2 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Nhej1Q3KNJ2 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nhej1Q3KNJ2 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nhej1Q3KNJ2 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nhej1Q3KNJ2 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nhej1Q3KNJ2 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Nhej1Q3KNJ2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nhej1Q3KNJ2 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Nhej1Q3KNJ2 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Nhej1Q3KNJ2 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nhej1Q3KNJ2 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nhej1Q3KNJ2 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nhej1Q3KNJ2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
Nhej1Q3KNJ2 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Nhej1Q3KNJ2 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nhej1Q3KNJ2 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.55■□□□□ 0.24
Nhej1Q3KNJ2 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nhej1Q3KNJ2 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.55■□□□□ 0.24
Nhej1Q3KNJ2 Gm10252-201ENSMUST00000209541 832 ntBASIC16.55■□□□□ 0.24
Nhej1Q3KNJ2 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Nhej1Q3KNJ2 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Nhej1Q3KNJ2 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nhej1Q3KNJ2 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nhej1Q3KNJ2 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nhej1Q3KNJ2 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nhej1Q3KNJ2 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Nhej1Q3KNJ2 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Nhej1Q3KNJ2 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nhej1Q3KNJ2 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nhej1Q3KNJ2 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nhej1Q3KNJ2 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nhej1Q3KNJ2 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nhej1Q3KNJ2 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Nhej1Q3KNJ2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Nhej1Q3KNJ2 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Nhej1Q3KNJ2 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nhej1Q3KNJ2 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nhej1Q3KNJ2 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nhej1Q3KNJ2 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nhej1Q3KNJ2 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nhej1Q3KNJ2 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nhej1Q3KNJ2 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.54■□□□□ 0.24
Nhej1Q3KNJ2 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nhej1Q3KNJ2 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Nhej1Q3KNJ2 Gm11950-201ENSMUST00000121615 838 ntBASIC16.54■□□□□ 0.24
Nhej1Q3KNJ2 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nhej1Q3KNJ2 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Nhej1Q3KNJ2 Gm6345-202ENSMUST00000180900 204 ntBASIC16.54■□□□□ 0.24
Nhej1Q3KNJ2 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Nhej1Q3KNJ2 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.54■□□□□ 0.24
Nhej1Q3KNJ2 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.54■□□□□ 0.24
Nhej1Q3KNJ2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Nhej1Q3KNJ2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Nhej1Q3KNJ2 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nhej1Q3KNJ2 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nhej1Q3KNJ2 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Nhej1Q3KNJ2 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nhej1Q3KNJ2 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.54■□□□□ 0.24
Nhej1Q3KNJ2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nhej1Q3KNJ2 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nhej1Q3KNJ2 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nhej1Q3KNJ2 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.54■□□□□ 0.24
Nhej1Q3KNJ2 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Nhej1Q3KNJ2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nhej1Q3KNJ2 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nhej1Q3KNJ2 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nhej1Q3KNJ2 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.53■□□□□ 0.24
Nhej1Q3KNJ2 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nhej1Q3KNJ2 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nhej1Q3KNJ2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nhej1Q3KNJ2 Gm13312-201ENSMUST00000119631 718 ntBASIC16.53■□□□□ 0.24
Nhej1Q3KNJ2 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nhej1Q3KNJ2 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.53■□□□□ 0.24
Nhej1Q3KNJ2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nhej1Q3KNJ2 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.53■□□□□ 0.24
Nhej1Q3KNJ2 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nhej1Q3KNJ2 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms