Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim63Q38HM4 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim63Q38HM4 Gm9847-201ENSMUST00000052528 599 ntBASIC12.86□□□□□ -0.35
Trim63Q38HM4 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim63Q38HM4 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trim63Q38HM4 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim63Q38HM4 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
Trim63Q38HM4 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim63Q38HM4 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
Trim63Q38HM4 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim63Q38HM4 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim63Q38HM4 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.86□□□□□ -0.35
Trim63Q38HM4 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim63Q38HM4 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim63Q38HM4 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC12.86□□□□□ -0.35
Trim63Q38HM4 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim63Q38HM4 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim63Q38HM4 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim63Q38HM4 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.85□□□□□ -0.35
Trim63Q38HM4 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim63Q38HM4 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.85□□□□□ -0.35
Trim63Q38HM4 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.85□□□□□ -0.35
Trim63Q38HM4 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC12.85□□□□□ -0.35
Trim63Q38HM4 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim63Q38HM4 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim63Q38HM4 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim63Q38HM4 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Trim63Q38HM4 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim63Q38HM4 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Trim63Q38HM4 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim63Q38HM4 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim63Q38HM4 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim63Q38HM4 Gm15546-201ENSMUST00000122095 826 ntBASIC12.85□□□□□ -0.35
Trim63Q38HM4 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim63Q38HM4 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim63Q38HM4 Gm9207-201ENSMUST00000198773 1115 ntBASIC12.85□□□□□ -0.35
Trim63Q38HM4 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC12.85□□□□□ -0.35
Trim63Q38HM4 Golgb1-201ENSMUST00000023534 498 ntBASIC12.85□□□□□ -0.35
Trim63Q38HM4 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim63Q38HM4 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim63Q38HM4 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim63Q38HM4 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trim63Q38HM4 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim63Q38HM4 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim63Q38HM4 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim63Q38HM4 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim63Q38HM4 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim63Q38HM4 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim63Q38HM4 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim63Q38HM4 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim63Q38HM4 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim63Q38HM4 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim63Q38HM4 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim63Q38HM4 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim63Q38HM4 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim63Q38HM4 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC12.85□□□□□ -0.35
Trim63Q38HM4 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim63Q38HM4 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim63Q38HM4 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim63Q38HM4 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim63Q38HM4 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.84□□□□□ -0.35
Trim63Q38HM4 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim63Q38HM4 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.84□□□□□ -0.35
Trim63Q38HM4 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim63Q38HM4 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Trim63Q38HM4 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trim63Q38HM4 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim63Q38HM4 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim63Q38HM4 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Trim63Q38HM4 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim63Q38HM4 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim63Q38HM4 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.84□□□□□ -0.35
Trim63Q38HM4 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim63Q38HM4 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim63Q38HM4 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.84□□□□□ -0.35
Trim63Q38HM4 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Trim63Q38HM4 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim63Q38HM4 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim63Q38HM4 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim63Q38HM4 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim63Q38HM4 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim63Q38HM4 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim63Q38HM4 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim63Q38HM4 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim63Q38HM4 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim63Q38HM4 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim63Q38HM4 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim63Q38HM4 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trim63Q38HM4 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trim63Q38HM4 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trim63Q38HM4 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Trim63Q38HM4 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trim63Q38HM4 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.83□□□□□ -0.35
Trim63Q38HM4 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim63Q38HM4 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim63Q38HM4 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim63Q38HM4 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim63Q38HM4 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trim63Q38HM4 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim63Q38HM4 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms