Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.25■□□□□ 0.03
Sox4Q06831 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Sox4Q06831 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Sox4Q06831 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox4Q06831 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox4Q06831 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
Sox4Q06831 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox4Q06831 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Sox4Q06831 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.25■□□□□ 0.03
Sox4Q06831 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Sox4Q06831 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Sox4Q06831 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox4Q06831 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Sox4Q06831 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sox4Q06831 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.24■□□□□ 0.03
Sox4Q06831 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox4Q06831 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox4Q06831 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.24■□□□□ 0.03
Sox4Q06831 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.24■□□□□ 0.03
Sox4Q06831 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sox4Q06831 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.24■□□□□ 0.03
Sox4Q06831 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Sox4Q06831 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Sox4Q06831 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Sox4Q06831 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox4Q06831 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox4Q06831 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox4Q06831 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.24■□□□□ 0.03
Sox4Q06831 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox4Q06831 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Sox4Q06831 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox4Q06831 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Sox4Q06831 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox4Q06831 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox4Q06831 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Sox4Q06831 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox4Q06831 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox4Q06831 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.23■□□□□ 0.03
Sox4Q06831 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox4Q06831 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox4Q06831 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox4Q06831 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox4Q06831 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sox4Q06831 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Sox4Q06831 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.23■□□□□ 0.03
Sox4Q06831 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.23■□□□□ 0.03
Sox4Q06831 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox4Q06831 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox4Q06831 Gm37153-201ENSMUST00000193637 231 ntBASIC15.23■□□□□ 0.03
Sox4Q06831 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.23■□□□□ 0.03
Sox4Q06831 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sox4Q06831 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox4Q06831 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.23■□□□□ 0.03
Sox4Q06831 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.23■□□□□ 0.03
Sox4Q06831 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.23■□□□□ 0.03
Sox4Q06831 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.23■□□□□ 0.03
Sox4Q06831 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.23■□□□□ 0.03
Sox4Q06831 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Sox4Q06831 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox4Q06831 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox4Q06831 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox4Q06831 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.23■□□□□ 0.03
Sox4Q06831 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox4Q06831 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox4Q06831 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox4Q06831 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox4Q06831 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox4Q06831 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox4Q06831 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox4Q06831 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.23■□□□□ 0.03
Sox4Q06831 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.23■□□□□ 0.03
Sox4Q06831 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sox4Q06831 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox4Q06831 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox4Q06831 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox4Q06831 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox4Q06831 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox4Q06831 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox4Q06831 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox4Q06831 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox4Q06831 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sox4Q06831 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.22■□□□□ 0.03
Sox4Q06831 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox4Q06831 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox4Q06831 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox4Q06831 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.22■□□□□ 0.03
Sox4Q06831 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sox4Q06831 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.22■□□□□ 0.03
Sox4Q06831 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Sox4Q06831 Gm27628-201ENSMUST00000184911 107 ntBASIC15.22■□□□□ 0.03
Sox4Q06831 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.22■□□□□ 0.03
Sox4Q06831 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox4Q06831 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox4Q06831 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sox4Q06831 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.22■□□□□ 0.03
Sox4Q06831 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox4Q06831 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sox4Q06831 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.22■□□□□ 0.03
Sox4Q06831 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox4Q06831 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms