Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atf4Q06507 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atf4Q06507 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atf4Q06507 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.78□□□□□ -0.04
Atf4Q06507 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Atf4Q06507 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.78□□□□□ -0.04
Atf4Q06507 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.78□□□□□ -0.04
Atf4Q06507 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.78□□□□□ -0.04
Atf4Q06507 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.78□□□□□ -0.04
Atf4Q06507 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atf4Q06507 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atf4Q06507 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atf4Q06507 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Atf4Q06507 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atf4Q06507 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atf4Q06507 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atf4Q06507 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atf4Q06507 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.78□□□□□ -0.04
Atf4Q06507 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atf4Q06507 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Atf4Q06507 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Atf4Q06507 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Atf4Q06507 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Atf4Q06507 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Atf4Q06507 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Atf4Q06507 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Atf4Q06507 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Atf4Q06507 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Atf4Q06507 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Atf4Q06507 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Atf4Q06507 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Atf4Q06507 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.77□□□□□ -0.05
Atf4Q06507 Gm26308-201ENSMUST00000157768 69 ntBASIC14.77□□□□□ -0.05
Atf4Q06507 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Atf4Q06507 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Atf4Q06507 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.77□□□□□ -0.05
Atf4Q06507 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.77□□□□□ -0.05
Atf4Q06507 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Atf4Q06507 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Atf4Q06507 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Atf4Q06507 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Atf4Q06507 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Atf4Q06507 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Atf4Q06507 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Atf4Q06507 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Atf4Q06507 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Atf4Q06507 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Atf4Q06507 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Atf4Q06507 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Atf4Q06507 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atf4Q06507 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atf4Q06507 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atf4Q06507 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.76□□□□□ -0.05
Atf4Q06507 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Atf4Q06507 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atf4Q06507 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atf4Q06507 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Atf4Q06507 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Atf4Q06507 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Atf4Q06507 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atf4Q06507 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.76□□□□□ -0.05
Atf4Q06507 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Atf4Q06507 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atf4Q06507 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atf4Q06507 Gm11780-201ENSMUST00000136880 516 ntBASIC14.76□□□□□ -0.05
Atf4Q06507 Gm12497-201ENSMUST00000138778 237 ntBASIC14.76□□□□□ -0.05
Atf4Q06507 Gm5244-202ENSMUST00000189517 743 ntBASIC14.76□□□□□ -0.05
Atf4Q06507 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Atf4Q06507 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.76□□□□□ -0.05
Atf4Q06507 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atf4Q06507 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atf4Q06507 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atf4Q06507 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atf4Q06507 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Atf4Q06507 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.76□□□□□ -0.05
Atf4Q06507 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.76□□□□□ -0.05
Atf4Q06507 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atf4Q06507 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.76□□□□□ -0.05
Atf4Q06507 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atf4Q06507 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atf4Q06507 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Atf4Q06507 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atf4Q06507 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Atf4Q06507 Prob1-201ENSMUST00000097619 3021 ntBASIC14.76□□□□□ -0.05
Atf4Q06507 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atf4Q06507 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Atf4Q06507 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atf4Q06507 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atf4Q06507 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atf4Q06507 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Atf4Q06507 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Atf4Q06507 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Atf4Q06507 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Atf4Q06507 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Atf4Q06507 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Atf4Q06507 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Atf4Q06507 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Atf4Q06507 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Atf4Q06507 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Atf4Q06507 Gm13216-201ENSMUST00000117145 591 ntBASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms