Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col10a1Q05306 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col10a1Q05306 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col10a1Q05306 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Col10a1Q05306 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col10a1Q05306 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Col10a1Q05306 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Col10a1Q05306 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col10a1Q05306 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Col10a1Q05306 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col10a1Q05306 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col10a1Q05306 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col10a1Q05306 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col10a1Q05306 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Col10a1Q05306 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Col10a1Q05306 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col10a1Q05306 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.32□□□□□ -0.12
Col10a1Q05306 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col10a1Q05306 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col10a1Q05306 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Col10a1Q05306 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col10a1Q05306 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
Col10a1Q05306 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.32□□□□□ -0.12
Col10a1Q05306 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col10a1Q05306 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.32□□□□□ -0.12
Col10a1Q05306 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col10a1Q05306 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Col10a1Q05306 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col10a1Q05306 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col10a1Q05306 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col10a1Q05306 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col10a1Q05306 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col10a1Q05306 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col10a1Q05306 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col10a1Q05306 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.31□□□□□ -0.12
Col10a1Q05306 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col10a1Q05306 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col10a1Q05306 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col10a1Q05306 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col10a1Q05306 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col10a1Q05306 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col10a1Q05306 Gm25990-201ENSMUST00000102440 86 ntBASIC14.31□□□□□ -0.12
Col10a1Q05306 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.31□□□□□ -0.12
Col10a1Q05306 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.31□□□□□ -0.12
Col10a1Q05306 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col10a1Q05306 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.31□□□□□ -0.12
Col10a1Q05306 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col10a1Q05306 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.31□□□□□ -0.12
Col10a1Q05306 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col10a1Q05306 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Col10a1Q05306 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Col10a1Q05306 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col10a1Q05306 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col10a1Q05306 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Col10a1Q05306 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col10a1Q05306 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col10a1Q05306 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col10a1Q05306 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Col10a1Q05306 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.3□□□□□ -0.12
Col10a1Q05306 Gm7862-201ENSMUST00000121461 292 ntBASIC14.3□□□□□ -0.12
Col10a1Q05306 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Col10a1Q05306 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.3□□□□□ -0.12
Col10a1Q05306 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.3□□□□□ -0.12
Col10a1Q05306 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col10a1Q05306 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col10a1Q05306 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col10a1Q05306 Gm7461-201ENSMUST00000058918 827 ntBASIC14.3□□□□□ -0.12
Col10a1Q05306 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.3□□□□□ -0.12
Col10a1Q05306 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col10a1Q05306 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col10a1Q05306 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col10a1Q05306 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.3□□□□□ -0.12
Col10a1Q05306 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col10a1Q05306 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col10a1Q05306 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col10a1Q05306 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.3□□□□□ -0.12
Col10a1Q05306 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col10a1Q05306 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col10a1Q05306 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Col10a1Q05306 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col10a1Q05306 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col10a1Q05306 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col10a1Q05306 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col10a1Q05306 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col10a1Q05306 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col10a1Q05306 Gm27646-201ENSMUST00000183989 110 ntBASIC14.29□□□□□ -0.12
Col10a1Q05306 Gm6089-201ENSMUST00000197666 938 ntBASIC14.29□□□□□ -0.12
Col10a1Q05306 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.29□□□□□ -0.12
Col10a1Q05306 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.29□□□□□ -0.12
Col10a1Q05306 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col10a1Q05306 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col10a1Q05306 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Col10a1Q05306 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.29□□□□□ -0.12
Col10a1Q05306 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col10a1Q05306 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.29□□□□□ -0.12
Col10a1Q05306 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.29□□□□□ -0.12
Col10a1Q05306 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Col10a1Q05306 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col10a1Q05306 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.29□□□□□ -0.12
Col10a1Q05306 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms