Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col8a1Q00780 Gm9682-201ENSMUST00000197505 556 ntBASIC13.23□□□□□ -0.29
Col8a1Q00780 Gm20553-201ENSMUST00000204205 844 ntBASIC13.23□□□□□ -0.29
Col8a1Q00780 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col8a1Q00780 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.23□□□□□ -0.29
Col8a1Q00780 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col8a1Q00780 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col8a1Q00780 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col8a1Q00780 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col8a1Q00780 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col8a1Q00780 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col8a1Q00780 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Col8a1Q00780 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col8a1Q00780 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col8a1Q00780 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col8a1Q00780 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col8a1Q00780 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col8a1Q00780 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col8a1Q00780 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Col8a1Q00780 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col8a1Q00780 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Col8a1Q00780 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col8a1Q00780 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col8a1Q00780 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col8a1Q00780 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col8a1Q00780 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col8a1Q00780 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col8a1Q00780 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Col8a1Q00780 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.22□□□□□ -0.29
Col8a1Q00780 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col8a1Q00780 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col8a1Q00780 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.22□□□□□ -0.29
Col8a1Q00780 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Col8a1Q00780 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.22□□□□□ -0.29
Col8a1Q00780 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col8a1Q00780 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Col8a1Q00780 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.22□□□□□ -0.29
Col8a1Q00780 Gm7774-201ENSMUST00000200064 533 ntBASIC13.22□□□□□ -0.29
Col8a1Q00780 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.22□□□□□ -0.29
Col8a1Q00780 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col8a1Q00780 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col8a1Q00780 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Col8a1Q00780 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col8a1Q00780 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col8a1Q00780 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col8a1Q00780 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col8a1Q00780 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col8a1Q00780 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col8a1Q00780 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col8a1Q00780 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Col8a1Q00780 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.22□□□□□ -0.29
Col8a1Q00780 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Col8a1Q00780 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col8a1Q00780 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Col8a1Q00780 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col8a1Q00780 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Col8a1Q00780 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Col8a1Q00780 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col8a1Q00780 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col8a1Q00780 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Col8a1Q00780 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col8a1Q00780 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.21□□□□□ -0.29
Col8a1Q00780 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col8a1Q00780 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col8a1Q00780 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.21□□□□□ -0.29
Col8a1Q00780 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col8a1Q00780 Gm12151-201ENSMUST00000121374 290 ntBASIC13.21□□□□□ -0.29
Col8a1Q00780 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.21□□□□□ -0.29
Col8a1Q00780 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.21□□□□□ -0.29
Col8a1Q00780 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.21□□□□□ -0.29
Col8a1Q00780 Rprl2-201ENSMUST00000157150 290 ntBASIC13.21□□□□□ -0.29
Col8a1Q00780 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Col8a1Q00780 Mir6404-201ENSMUST00000183699 94 ntBASIC13.21□□□□□ -0.29
Col8a1Q00780 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.21□□□□□ -0.29
Col8a1Q00780 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.21□□□□□ -0.29
Col8a1Q00780 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col8a1Q00780 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col8a1Q00780 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Col8a1Q00780 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.21□□□□□ -0.29
Col8a1Q00780 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col8a1Q00780 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col8a1Q00780 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col8a1Q00780 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC13.21□□□□□ -0.29
Col8a1Q00780 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col8a1Q00780 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Col8a1Q00780 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col8a1Q00780 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col8a1Q00780 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col8a1Q00780 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.21□□□□□ -0.3
Col8a1Q00780 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC13.21□□□□□ -0.3
Col8a1Q00780 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.21□□□□□ -0.3
Col8a1Q00780 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col8a1Q00780 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col8a1Q00780 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col8a1Q00780 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col8a1Q00780 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col8a1Q00780 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Col8a1Q00780 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col8a1Q00780 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col8a1Q00780 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms