Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx3-1P97436 Dancr-204ENSMUST00000132389 2347 ntBASIC13.4□□□□□ -0.26
Nkx3-1P97436 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx3-1P97436 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx3-1P97436 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.4□□□□□ -0.26
Nkx3-1P97436 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx3-1P97436 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx3-1P97436 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx3-1P97436 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Nkx3-1P97436 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx3-1P97436 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
Nkx3-1P97436 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Nkx3-1P97436 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Nkx3-1P97436 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-1P97436 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-1P97436 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-1P97436 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-1P97436 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.39□□□□□ -0.27
Nkx3-1P97436 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.39□□□□□ -0.27
Nkx3-1P97436 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-1P97436 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-1P97436 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-1P97436 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-1P97436 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Nkx3-1P97436 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-1P97436 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.39□□□□□ -0.27
Nkx3-1P97436 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Nkx3-1P97436 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-1P97436 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-1P97436 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.39□□□□□ -0.27
Nkx3-1P97436 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.39□□□□□ -0.27
Nkx3-1P97436 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-1P97436 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.39□□□□□ -0.27
Nkx3-1P97436 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.39□□□□□ -0.27
Nkx3-1P97436 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.39□□□□□ -0.27
Nkx3-1P97436 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-1P97436 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Nkx3-1P97436 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-1P97436 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-1P97436 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-1P97436 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-1P97436 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-1P97436 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-1P97436 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-1P97436 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-1P97436 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Nkx3-1P97436 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Nkx3-1P97436 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-1P97436 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx3-1P97436 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Nkx3-1P97436 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.38□□□□□ -0.27
Nkx3-1P97436 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-1P97436 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-1P97436 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-1P97436 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-1P97436 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.38□□□□□ -0.27
Nkx3-1P97436 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-1P97436 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Nkx3-1P97436 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-1P97436 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Nkx3-1P97436 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.38□□□□□ -0.27
Nkx3-1P97436 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-1P97436 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.38□□□□□ -0.27
Nkx3-1P97436 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-1P97436 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.38□□□□□ -0.27
Nkx3-1P97436 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Nkx3-1P97436 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-1P97436 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-1P97436 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.38□□□□□ -0.27
Nkx3-1P97436 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Nkx3-1P97436 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-1P97436 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-1P97436 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Nkx3-1P97436 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-1P97436 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-1P97436 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-1P97436 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-1P97436 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-1P97436 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Nkx3-1P97436 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-1P97436 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-1P97436 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx3-1P97436 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx3-1P97436 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx3-1P97436 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx3-1P97436 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx3-1P97436 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx3-1P97436 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.37□□□□□ -0.27
Nkx3-1P97436 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Nkx3-1P97436 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx3-1P97436 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx3-1P97436 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx3-1P97436 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx3-1P97436 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx3-1P97436 Gm15920-201ENSMUST00000118998 402 ntBASIC13.37□□□□□ -0.27
Nkx3-1P97436 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.37□□□□□ -0.27
Nkx3-1P97436 Auts2-212ENSMUST00000178555 309 ntBASIC13.37□□□□□ -0.27
Nkx3-1P97436 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.37□□□□□ -0.27
Nkx3-1P97436 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx3-1P97436 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms