Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm2651-201ENSMUST00000203560 838 ntBASIC13.84□□□□□ -0.19
SgcbP82349 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.84□□□□□ -0.19
SgcbP82349 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SgcbP82349 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.84□□□□□ -0.19
SgcbP82349 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SgcbP82349 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SgcbP82349 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SgcbP82349 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
SgcbP82349 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SgcbP82349 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SgcbP82349 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SgcbP82349 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SgcbP82349 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.84□□□□□ -0.19
SgcbP82349 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.19
SgcbP82349 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SgcbP82349 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SgcbP82349 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SgcbP82349 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SgcbP82349 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SgcbP82349 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SgcbP82349 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SgcbP82349 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
SgcbP82349 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SgcbP82349 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.83□□□□□ -0.2
SgcbP82349 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.83□□□□□ -0.2
SgcbP82349 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SgcbP82349 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SgcbP82349 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.83□□□□□ -0.2
SgcbP82349 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.83□□□□□ -0.2
SgcbP82349 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SgcbP82349 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SgcbP82349 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SgcbP82349 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.83□□□□□ -0.2
SgcbP82349 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SgcbP82349 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SgcbP82349 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SgcbP82349 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.83□□□□□ -0.2
SgcbP82349 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SgcbP82349 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SgcbP82349 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SgcbP82349 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SgcbP82349 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SgcbP82349 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SgcbP82349 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SgcbP82349 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SgcbP82349 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SgcbP82349 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SgcbP82349 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SgcbP82349 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SgcbP82349 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SgcbP82349 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SgcbP82349 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SgcbP82349 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SgcbP82349 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SgcbP82349 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SgcbP82349 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SgcbP82349 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SgcbP82349 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SgcbP82349 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SgcbP82349 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SgcbP82349 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC13.82□□□□□ -0.2
SgcbP82349 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.82□□□□□ -0.2
SgcbP82349 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.82□□□□□ -0.2
SgcbP82349 Gm6550-201ENSMUST00000187574 993 ntBASIC13.82□□□□□ -0.2
SgcbP82349 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
SgcbP82349 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SgcbP82349 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SgcbP82349 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SgcbP82349 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SgcbP82349 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SgcbP82349 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SgcbP82349 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SgcbP82349 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SgcbP82349 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SgcbP82349 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SgcbP82349 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
SgcbP82349 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SgcbP82349 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SgcbP82349 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.81□□□□□ -0.2
SgcbP82349 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SgcbP82349 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SgcbP82349 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
SgcbP82349 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SgcbP82349 Gm15358-201ENSMUST00000119249 520 ntBASIC13.81□□□□□ -0.2
SgcbP82349 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SgcbP82349 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SgcbP82349 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SgcbP82349 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.81□□□□□ -0.2
SgcbP82349 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.81□□□□□ -0.2
SgcbP82349 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.81□□□□□ -0.2
SgcbP82349 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SgcbP82349 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SgcbP82349 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SgcbP82349 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SgcbP82349 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SgcbP82349 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SgcbP82349 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.81□□□□□ -0.2
SgcbP82349 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SgcbP82349 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SgcbP82349 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms