Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Crnkl1P63154 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Crnkl1P63154 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Crnkl1P63154 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Crnkl1P63154 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Crnkl1P63154 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Crnkl1P63154 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Crnkl1P63154 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Crnkl1P63154 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Crnkl1P63154 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Crnkl1P63154 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Crnkl1P63154 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Crnkl1P63154 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Crnkl1P63154 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Crnkl1P63154 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Crnkl1P63154 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.41■□□□□ 0.06
Crnkl1P63154 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Crnkl1P63154 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Crnkl1P63154 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Crnkl1P63154 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.41■□□□□ 0.06
Crnkl1P63154 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Crnkl1P63154 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Crnkl1P63154 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Crnkl1P63154 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Crnkl1P63154 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Crnkl1P63154 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Crnkl1P63154 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Crnkl1P63154 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Crnkl1P63154 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Crnkl1P63154 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Crnkl1P63154 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.4■□□□□ 0.06
Crnkl1P63154 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Crnkl1P63154 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Crnkl1P63154 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Crnkl1P63154 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Crnkl1P63154 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Crnkl1P63154 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Crnkl1P63154 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Crnkl1P63154 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Crnkl1P63154 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Crnkl1P63154 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Crnkl1P63154 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Crnkl1P63154 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.4■□□□□ 0.06
Crnkl1P63154 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Crnkl1P63154 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Crnkl1P63154 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Crnkl1P63154 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Crnkl1P63154 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Crnkl1P63154 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Crnkl1P63154 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Crnkl1P63154 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.4■□□□□ 0.06
Crnkl1P63154 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Crnkl1P63154 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Crnkl1P63154 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.4■□□□□ 0.06
Crnkl1P63154 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Crnkl1P63154 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Crnkl1P63154 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Crnkl1P63154 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Crnkl1P63154 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Crnkl1P63154 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Crnkl1P63154 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Crnkl1P63154 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.39■□□□□ 0.05
Crnkl1P63154 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Crnkl1P63154 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Crnkl1P63154 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.39■□□□□ 0.05
Crnkl1P63154 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.39■□□□□ 0.05
Crnkl1P63154 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.39■□□□□ 0.05
Crnkl1P63154 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Crnkl1P63154 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Crnkl1P63154 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Crnkl1P63154 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.39■□□□□ 0.05
Crnkl1P63154 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Crnkl1P63154 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Crnkl1P63154 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Crnkl1P63154 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Crnkl1P63154 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Crnkl1P63154 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Crnkl1P63154 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Crnkl1P63154 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Crnkl1P63154 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Crnkl1P63154 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Crnkl1P63154 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Crnkl1P63154 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Crnkl1P63154 Gm13474-201ENSMUST00000122466 815 ntBASIC15.38■□□□□ 0.05
Crnkl1P63154 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Crnkl1P63154 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.38■□□□□ 0.05
Crnkl1P63154 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Crnkl1P63154 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Crnkl1P63154 Mir5130-201ENSMUST00000175160 84 ntBASIC15.38■□□□□ 0.05
Crnkl1P63154 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Crnkl1P63154 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Crnkl1P63154 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Crnkl1P63154 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Crnkl1P63154 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Crnkl1P63154 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Crnkl1P63154 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Crnkl1P63154 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Crnkl1P63154 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Crnkl1P63154 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Crnkl1P63154 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms