Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vbp1P61759 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vbp1P61759 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vbp1P61759 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vbp1P61759 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vbp1P61759 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vbp1P61759 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
Vbp1P61759 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vbp1P61759 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vbp1P61759 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vbp1P61759 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.14□□□□□ -0.15
Vbp1P61759 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vbp1P61759 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vbp1P61759 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vbp1P61759 Gm13186-201ENSMUST00000118031 316 ntBASIC14.14□□□□□ -0.15
Vbp1P61759 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.14□□□□□ -0.15
Vbp1P61759 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vbp1P61759 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Vbp1P61759 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vbp1P61759 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vbp1P61759 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vbp1P61759 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vbp1P61759 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vbp1P61759 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vbp1P61759 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vbp1P61759 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vbp1P61759 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vbp1P61759 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vbp1P61759 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vbp1P61759 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vbp1P61759 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.14□□□□□ -0.15
Vbp1P61759 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.14□□□□□ -0.15
Vbp1P61759 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Vbp1P61759 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vbp1P61759 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vbp1P61759 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vbp1P61759 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.13□□□□□ -0.15
Vbp1P61759 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vbp1P61759 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vbp1P61759 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vbp1P61759 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vbp1P61759 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vbp1P61759 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Vbp1P61759 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vbp1P61759 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vbp1P61759 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Vbp1P61759 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.13□□□□□ -0.15
Vbp1P61759 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vbp1P61759 Mir5133-201ENSMUST00000174955 77 ntBASIC14.13□□□□□ -0.15
Vbp1P61759 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC14.13□□□□□ -0.15
Vbp1P61759 Gm43183-201ENSMUST00000200632 547 ntBASIC14.13□□□□□ -0.15
Vbp1P61759 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.13□□□□□ -0.15
Vbp1P61759 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vbp1P61759 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vbp1P61759 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vbp1P61759 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Vbp1P61759 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Vbp1P61759 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vbp1P61759 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vbp1P61759 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vbp1P61759 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Vbp1P61759 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Vbp1P61759 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vbp1P61759 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vbp1P61759 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vbp1P61759 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vbp1P61759 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vbp1P61759 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.12□□□□□ -0.15
Vbp1P61759 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vbp1P61759 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vbp1P61759 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vbp1P61759 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vbp1P61759 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.12□□□□□ -0.15
Vbp1P61759 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vbp1P61759 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vbp1P61759 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vbp1P61759 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Vbp1P61759 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vbp1P61759 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vbp1P61759 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Vbp1P61759 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.12□□□□□ -0.15
Vbp1P61759 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vbp1P61759 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vbp1P61759 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vbp1P61759 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Vbp1P61759 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.11□□□□□ -0.15
Vbp1P61759 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.11□□□□□ -0.15
Vbp1P61759 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vbp1P61759 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vbp1P61759 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Vbp1P61759 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
Vbp1P61759 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.11□□□□□ -0.15
Vbp1P61759 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.11□□□□□ -0.15
Vbp1P61759 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Vbp1P61759 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vbp1P61759 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.11□□□□□ -0.15
Vbp1P61759 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.11□□□□□ -0.15
Vbp1P61759 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vbp1P61759 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vbp1P61759 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms