Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Cks1bP61025 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1bP61025 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1bP61025 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1bP61025 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1bP61025 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Cks1bP61025 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1bP61025 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Cks1bP61025 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1bP61025 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1bP61025 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1bP61025 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1bP61025 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1bP61025 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1bP61025 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1bP61025 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC11.1□□□□□ -0.63
Cks1bP61025 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC11.1□□□□□ -0.63
Cks1bP61025 Gm27275-201ENSMUST00000184318 272 ntBASIC11.1□□□□□ -0.63
Cks1bP61025 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC11.1□□□□□ -0.63
Cks1bP61025 Gm43183-201ENSMUST00000200632 547 ntBASIC11.1□□□□□ -0.63
Cks1bP61025 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1bP61025 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1bP61025 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.1□□□□□ -0.63
Cks1bP61025 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1bP61025 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1bP61025 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.1□□□□□ -0.63
Cks1bP61025 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1bP61025 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1bP61025 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1bP61025 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1bP61025 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1bP61025 AC174678.1-201ENSMUST00000228007 2749 ntBASIC11.1□□□□□ -0.63
Cks1bP61025 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC11.1□□□□□ -0.63
Cks1bP61025 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1bP61025 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1bP61025 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1bP61025 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1bP61025 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1bP61025 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1bP61025 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1bP61025 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1bP61025 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Cks1bP61025 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1bP61025 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cks1bP61025 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.09□□□□□ -0.63
Cks1bP61025 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Cks1bP61025 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1bP61025 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1bP61025 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1bP61025 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Cks1bP61025 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1bP61025 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1bP61025 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1bP61025 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1bP61025 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1bP61025 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1bP61025 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1bP61025 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1bP61025 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Cks1bP61025 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1bP61025 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1bP61025 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1bP61025 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1bP61025 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1bP61025 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1bP61025 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC11.09□□□□□ -0.63
Cks1bP61025 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC11.09□□□□□ -0.63
Cks1bP61025 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC11.09□□□□□ -0.63
Cks1bP61025 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1bP61025 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1bP61025 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1bP61025 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1bP61025 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Cks1bP61025 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1bP61025 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1bP61025 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC11.09□□□□□ -0.63
Cks1bP61025 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC11.09□□□□□ -0.63
Cks1bP61025 Gm9768-201ENSMUST00000206007 2861 ntBASIC11.09□□□□□ -0.63
Cks1bP61025 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1bP61025 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1bP61025 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1bP61025 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Cks1bP61025 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1bP61025 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1bP61025 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.63
Cks1bP61025 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.63
Cks1bP61025 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1bP61025 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Cks1bP61025 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1bP61025 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Cks1bP61025 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1bP61025 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1bP61025 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1bP61025 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1bP61025 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1bP61025 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1bP61025 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1bP61025 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC11.08□□□□□ -0.64
Cks1bP61025 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Cks1bP61025 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms