Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nphp4P59240 Gm45412-201ENSMUST00000210217 2275 ntBASIC20.9■□□□□ 0.94
Nphp4P59240 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC20.9■□□□□ 0.94
Nphp4P59240 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nphp4P59240 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nphp4P59240 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Nphp4P59240 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nphp4P59240 Gm6018-201ENSMUST00000216090 1306 ntBASIC20.9■□□□□ 0.94
Nphp4P59240 AC069562.2-201ENSMUST00000224644 2146 ntBASIC20.89■□□□□ 0.94
Nphp4P59240 Gm12017-201ENSMUST00000122453 1003 ntBASIC20.89■□□□□ 0.94
Nphp4P59240 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC20.89■□□□□ 0.94
Nphp4P59240 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Nphp4P59240 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC20.89■□□□□ 0.94
Nphp4P59240 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nphp4P59240 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nphp4P59240 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nphp4P59240 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Nphp4P59240 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nphp4P59240 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nphp4P59240 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Nphp4P59240 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nphp4P59240 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Nphp4P59240 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nphp4P59240 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC20.88■□□□□ 0.93
Nphp4P59240 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nphp4P59240 Mir449b-201ENSMUST00000104833 80 ntBASIC20.88■□□□□ 0.93
Nphp4P59240 Gm2810-201ENSMUST00000118681 990 ntBASIC20.88■□□□□ 0.93
Nphp4P59240 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC20.88■□□□□ 0.93
Nphp4P59240 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Nphp4P59240 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC20.88■□□□□ 0.93
Nphp4P59240 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC20.88■□□□□ 0.93
Nphp4P59240 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nphp4P59240 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nphp4P59240 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC20.88■□□□□ 0.93
Nphp4P59240 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Nphp4P59240 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC20.88■□□□□ 0.93
Nphp4P59240 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nphp4P59240 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nphp4P59240 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC20.88■□□□□ 0.93
Nphp4P59240 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nphp4P59240 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nphp4P59240 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nphp4P59240 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nphp4P59240 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nphp4P59240 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Nphp4P59240 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC20.87■□□□□ 0.93
Nphp4P59240 Gm8597-201ENSMUST00000191525 1109 ntBASIC20.87■□□□□ 0.93
Nphp4P59240 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC20.87■□□□□ 0.93
Nphp4P59240 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Nphp4P59240 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Nphp4P59240 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
Nphp4P59240 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nphp4P59240 Celf4-206ENSMUST00000224553 1729 ntBASIC20.87■□□□□ 0.93
Nphp4P59240 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nphp4P59240 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Nphp4P59240 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC20.87■□□□□ 0.93
Nphp4P59240 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Nphp4P59240 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nphp4P59240 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nphp4P59240 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Nphp4P59240 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nphp4P59240 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Nphp4P59240 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nphp4P59240 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Nphp4P59240 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nphp4P59240 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nphp4P59240 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nphp4P59240 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Nphp4P59240 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nphp4P59240 App-207ENSMUST00000227737 2827 ntBASIC20.87■□□□□ 0.93
Nphp4P59240 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nphp4P59240 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Nphp4P59240 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC20.87■□□□□ 0.93
Nphp4P59240 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC20.87■□□□□ 0.93
Nphp4P59240 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nphp4P59240 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC20.86■□□□□ 0.93
Nphp4P59240 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC20.86■□□□□ 0.93
Nphp4P59240 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nphp4P59240 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nphp4P59240 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nphp4P59240 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.86■□□□□ 0.93
Nphp4P59240 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nphp4P59240 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nphp4P59240 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nphp4P59240 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nphp4P59240 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nphp4P59240 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC20.86■□□□□ 0.93
Nphp4P59240 Gm10253-201ENSMUST00000194270 940 ntBASIC20.86■□□□□ 0.93
Nphp4P59240 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nphp4P59240 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC20.86■□□□□ 0.93
Nphp4P59240 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC20.86■□□□□ 0.93
Nphp4P59240 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nphp4P59240 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nphp4P59240 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nphp4P59240 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nphp4P59240 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nphp4P59240 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nphp4P59240 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nphp4P59240 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nphp4P59240 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms