Protein–RNA interactions for Protein: P57748

Mmp20, Matrix metalloproteinase-20, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp20P57748 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.72■□□□□ 0.43
Mmp20P57748 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp20P57748 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp20P57748 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp20P57748 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Mmp20P57748 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp20P57748 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp20P57748 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp20P57748 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp20P57748 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp20P57748 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp20P57748 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp20P57748 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp20P57748 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp20P57748 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp20P57748 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp20P57748 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp20P57748 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp20P57748 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.71■□□□□ 0.43
Mmp20P57748 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp20P57748 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.71■□□□□ 0.43
Mmp20P57748 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Mmp20P57748 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp20P57748 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.71■□□□□ 0.43
Mmp20P57748 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp20P57748 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.71■□□□□ 0.43
Mmp20P57748 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Mmp20P57748 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Mmp20P57748 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp20P57748 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp20P57748 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp20P57748 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.7■□□□□ 0.42
Mmp20P57748 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp20P57748 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp20P57748 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC17.7■□□□□ 0.42
Mmp20P57748 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Mmp20P57748 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC17.7■□□□□ 0.42
Mmp20P57748 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp20P57748 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.7■□□□□ 0.42
Mmp20P57748 Gm5779-201ENSMUST00000218467 910 ntBASIC17.7■□□□□ 0.42
Mmp20P57748 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.7■□□□□ 0.42
Mmp20P57748 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp20P57748 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp20P57748 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Mmp20P57748 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC17.7■□□□□ 0.42
Mmp20P57748 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Mmp20P57748 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp20P57748 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp20P57748 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp20P57748 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp20P57748 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Mmp20P57748 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp20P57748 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp20P57748 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.69■□□□□ 0.42
Mmp20P57748 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp20P57748 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp20P57748 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.69■□□□□ 0.42
Mmp20P57748 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp20P57748 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp20P57748 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Mmp20P57748 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp20P57748 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.69■□□□□ 0.42
Mmp20P57748 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp20P57748 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp20P57748 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp20P57748 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Mmp20P57748 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp20P57748 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp20P57748 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp20P57748 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp20P57748 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp20P57748 Gm6973-201ENSMUST00000117080 721 ntBASIC17.68■□□□□ 0.42
Mmp20P57748 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.68■□□□□ 0.42
Mmp20P57748 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp20P57748 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp20P57748 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp20P57748 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp20P57748 Gm5626-201ENSMUST00000222151 1058 ntBASIC17.68■□□□□ 0.42
Mmp20P57748 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp20P57748 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp20P57748 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp20P57748 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.68■□□□□ 0.42
Mmp20P57748 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp20P57748 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp20P57748 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp20P57748 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp20P57748 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp20P57748 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.68■□□□□ 0.42
Mmp20P57748 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp20P57748 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp20P57748 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.68■□□□□ 0.42
Mmp20P57748 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp20P57748 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp20P57748 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Mmp20P57748 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp20P57748 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp20P57748 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.67■□□□□ 0.42
Mmp20P57748 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp20P57748 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.67■□□□□ 0.42
Mmp20P57748 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms