Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Sssca1P56873 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Sssca1P56873 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Sssca1P56873 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sssca1P56873 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sssca1P56873 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Sssca1P56873 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Sssca1P56873 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sssca1P56873 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.58□□□□□ -0.4
Sssca1P56873 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sssca1P56873 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sssca1P56873 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sssca1P56873 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sssca1P56873 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sssca1P56873 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sssca1P56873 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sssca1P56873 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sssca1P56873 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sssca1P56873 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sssca1P56873 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sssca1P56873 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.57□□□□□ -0.4
Sssca1P56873 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sssca1P56873 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sssca1P56873 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.57□□□□□ -0.4
Sssca1P56873 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sssca1P56873 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sssca1P56873 Gm27011-201ENSMUST00000182352 972 ntBASIC12.57□□□□□ -0.4
Sssca1P56873 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.57□□□□□ -0.4
Sssca1P56873 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.57□□□□□ -0.4
Sssca1P56873 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Sssca1P56873 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.57□□□□□ -0.4
Sssca1P56873 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sssca1P56873 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sssca1P56873 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.57□□□□□ -0.4
Sssca1P56873 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sssca1P56873 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sssca1P56873 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Sssca1P56873 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Sssca1P56873 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sssca1P56873 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sssca1P56873 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.57□□□□□ -0.4
Sssca1P56873 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.57□□□□□ -0.4
Sssca1P56873 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.57□□□□□ -0.4
Sssca1P56873 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sssca1P56873 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sssca1P56873 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sssca1P56873 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sssca1P56873 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.56□□□□□ -0.4
Sssca1P56873 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.56□□□□□ -0.4
Sssca1P56873 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.56□□□□□ -0.4
Sssca1P56873 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sssca1P56873 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sssca1P56873 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sssca1P56873 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Sssca1P56873 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sssca1P56873 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sssca1P56873 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Sssca1P56873 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sssca1P56873 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.56□□□□□ -0.4
Sssca1P56873 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Sssca1P56873 Gm7889-201ENSMUST00000185591 958 ntBASIC12.56□□□□□ -0.4
Sssca1P56873 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.56□□□□□ -0.4
Sssca1P56873 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sssca1P56873 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Sssca1P56873 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.56□□□□□ -0.4
Sssca1P56873 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sssca1P56873 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sssca1P56873 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sssca1P56873 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Sssca1P56873 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sssca1P56873 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.56□□□□□ -0.4
Sssca1P56873 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.56□□□□□ -0.4
Sssca1P56873 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sssca1P56873 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Sssca1P56873 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sssca1P56873 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sssca1P56873 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Sssca1P56873 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sssca1P56873 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sssca1P56873 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sssca1P56873 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.55□□□□□ -0.4
Sssca1P56873 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sssca1P56873 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sssca1P56873 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Sssca1P56873 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sssca1P56873 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sssca1P56873 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Sssca1P56873 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sssca1P56873 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sssca1P56873 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sssca1P56873 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sssca1P56873 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sssca1P56873 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sssca1P56873 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sssca1P56873 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sssca1P56873 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Sssca1P56873 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sssca1P56873 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sssca1P56873 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sssca1P56873 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms