Protein–RNA interactions for Protein: P55284

Cdh5, Cadherin-5, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh5P55284 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh5P55284 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh5P55284 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh5P55284 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Cdh5P55284 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh5P55284 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh5P55284 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh5P55284 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Cdh5P55284 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh5P55284 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cdh5P55284 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh5P55284 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.16■□□□□ 0.02
Cdh5P55284 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.16■□□□□ 0.02
Cdh5P55284 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.16■□□□□ 0.02
Cdh5P55284 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh5P55284 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.16■□□□□ 0.02
Cdh5P55284 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh5P55284 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.16■□□□□ 0.02
Cdh5P55284 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh5P55284 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh5P55284 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh5P55284 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh5P55284 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh5P55284 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh5P55284 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.16■□□□□ 0.02
Cdh5P55284 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh5P55284 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.16■□□□□ 0.02
Cdh5P55284 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh5P55284 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh5P55284 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.15■□□□□ 0.02
Cdh5P55284 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh5P55284 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cdh5P55284 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh5P55284 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Cdh5P55284 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh5P55284 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Cdh5P55284 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.15■□□□□ 0.02
Cdh5P55284 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh5P55284 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.15■□□□□ 0.02
Cdh5P55284 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh5P55284 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.15■□□□□ 0.02
Cdh5P55284 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh5P55284 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh5P55284 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh5P55284 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh5P55284 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh5P55284 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh5P55284 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh5P55284 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Cdh5P55284 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh5P55284 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Cdh5P55284 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh5P55284 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh5P55284 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Cdh5P55284 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh5P55284 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh5P55284 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh5P55284 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh5P55284 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh5P55284 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh5P55284 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Cdh5P55284 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Cdh5P55284 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Cdh5P55284 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Cdh5P55284 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh5P55284 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Cdh5P55284 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh5P55284 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh5P55284 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh5P55284 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh5P55284 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh5P55284 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh5P55284 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh5P55284 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh5P55284 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh5P55284 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh5P55284 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh5P55284 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh5P55284 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.14■□□□□ 0.01
Cdh5P55284 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.14■□□□□ 0.01
Cdh5P55284 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.14■□□□□ 0.01
Cdh5P55284 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh5P55284 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh5P55284 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Cdh5P55284 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh5P55284 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cdh5P55284 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh5P55284 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh5P55284 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh5P55284 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh5P55284 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.13■□□□□ 0.01
Cdh5P55284 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cdh5P55284 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh5P55284 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Cdh5P55284 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Cdh5P55284 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cdh5P55284 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.13■□□□□ 0.01
Cdh5P55284 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.13■□□□□ 0.01
Cdh5P55284 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh5P55284 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms