Protein–RNA interactions for Protein: P54775

Psmc4, 26S proteasome regulatory subunit 6B, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc4P54775 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Psmc4P54775 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Psmc4P54775 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Psmc4P54775 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Psmc4P54775 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Psmc4P54775 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Psmc4P54775 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Psmc4P54775 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Psmc4P54775 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.59■□□□□ 0.41
Psmc4P54775 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC17.59■□□□□ 0.41
Psmc4P54775 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.59■□□□□ 0.41
Psmc4P54775 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Psmc4P54775 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Psmc4P54775 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Psmc4P54775 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Psmc4P54775 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Psmc4P54775 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Psmc4P54775 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Psmc4P54775 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Psmc4P54775 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Psmc4P54775 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Psmc4P54775 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Psmc4P54775 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.58■□□□□ 0.41
Psmc4P54775 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Psmc4P54775 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Psmc4P54775 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Psmc4P54775 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Psmc4P54775 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Psmc4P54775 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Psmc4P54775 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Psmc4P54775 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Psmc4P54775 Gm12428-201ENSMUST00000119844 727 ntBASIC17.58■□□□□ 0.4
Psmc4P54775 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Psmc4P54775 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.58■□□□□ 0.4
Psmc4P54775 Mir6977-201ENSMUST00000184960 64 ntBASIC17.58■□□□□ 0.4
Psmc4P54775 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Psmc4P54775 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Psmc4P54775 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Psmc4P54775 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Psmc4P54775 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Psmc4P54775 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.58■□□□□ 0.4
Psmc4P54775 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Psmc4P54775 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Psmc4P54775 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Psmc4P54775 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Psmc4P54775 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Psmc4P54775 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Psmc4P54775 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Psmc4P54775 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Psmc4P54775 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Psmc4P54775 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Psmc4P54775 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Psmc4P54775 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Psmc4P54775 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Psmc4P54775 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17.57■□□□□ 0.4
Psmc4P54775 Gm23547-201ENSMUST00000158210 271 ntBASIC17.57■□□□□ 0.4
Psmc4P54775 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Psmc4P54775 Gm27622-201ENSMUST00000183779 60 ntBASIC17.57■□□□□ 0.4
Psmc4P54775 Gm27430-201ENSMUST00000184585 107 ntBASIC17.57■□□□□ 0.4
Psmc4P54775 Gm44333-201ENSMUST00000197168 107 ntBASIC17.57■□□□□ 0.4
Psmc4P54775 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC17.57■□□□□ 0.4
Psmc4P54775 AC140375.2-201ENSMUST00000225283 584 ntBASIC17.57■□□□□ 0.4
Psmc4P54775 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Psmc4P54775 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Psmc4P54775 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Psmc4P54775 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Psmc4P54775 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.57■□□□□ 0.4
Psmc4P54775 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Psmc4P54775 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Psmc4P54775 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Psmc4P54775 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Psmc4P54775 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Psmc4P54775 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Psmc4P54775 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.56■□□□□ 0.4
Psmc4P54775 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Psmc4P54775 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Psmc4P54775 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Psmc4P54775 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Psmc4P54775 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Psmc4P54775 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Psmc4P54775 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Psmc4P54775 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Psmc4P54775 Grk6-207ENSMUST00000225925 2769 ntBASIC17.56■□□□□ 0.4
Psmc4P54775 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Psmc4P54775 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Psmc4P54775 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC17.56■□□□□ 0.4
Psmc4P54775 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Psmc4P54775 Gm7774-201ENSMUST00000200064 533 ntBASIC17.56■□□□□ 0.4
Psmc4P54775 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Psmc4P54775 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Psmc4P54775 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Psmc4P54775 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Psmc4P54775 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Psmc4P54775 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Psmc4P54775 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Psmc4P54775 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.56■□□□□ 0.4
Psmc4P54775 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Psmc4P54775 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Psmc4P54775 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Psmc4P54775 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms