Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox2P48432 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox2P48432 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sox2P48432 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.59□□□□□ -0.07
Sox2P48432 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox2P48432 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sox2P48432 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sox2P48432 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox2P48432 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Sox2P48432 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox2P48432 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox2P48432 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox2P48432 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox2P48432 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Sox2P48432 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox2P48432 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sox2P48432 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox2P48432 Gm37055-201ENSMUST00000191866 133 ntBASIC14.58□□□□□ -0.08
Sox2P48432 Gm37722-201ENSMUST00000193757 208 ntBASIC14.58□□□□□ -0.08
Sox2P48432 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox2P48432 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.58□□□□□ -0.08
Sox2P48432 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.58□□□□□ -0.08
Sox2P48432 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.58□□□□□ -0.08
Sox2P48432 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox2P48432 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Sox2P48432 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sox2P48432 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox2P48432 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox2P48432 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sox2P48432 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox2P48432 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox2P48432 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox2P48432 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox2P48432 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox2P48432 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Sox2P48432 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox2P48432 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox2P48432 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox2P48432 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox2P48432 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
Sox2P48432 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Sox2P48432 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sox2P48432 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox2P48432 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox2P48432 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox2P48432 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.57□□□□□ -0.08
Sox2P48432 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sox2P48432 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Sox2P48432 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox2P48432 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Sox2P48432 Gm13559-201ENSMUST00000120476 863 ntBASIC14.57□□□□□ -0.08
Sox2P48432 Gm6257-201ENSMUST00000163864 910 ntBASIC14.57□□□□□ -0.08
Sox2P48432 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sox2P48432 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Sox2P48432 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox2P48432 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox2P48432 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox2P48432 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox2P48432 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sox2P48432 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sox2P48432 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox2P48432 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sox2P48432 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox2P48432 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.57□□□□□ -0.08
Sox2P48432 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sox2P48432 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sox2P48432 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox2P48432 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox2P48432 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.57□□□□□ -0.08
Sox2P48432 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox2P48432 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sox2P48432 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox2P48432 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sox2P48432 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox2P48432 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox2P48432 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox2P48432 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox2P48432 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Sox2P48432 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox2P48432 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox2P48432 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox2P48432 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.56□□□□□ -0.08
Sox2P48432 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.56□□□□□ -0.08
Sox2P48432 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
Sox2P48432 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.56□□□□□ -0.08
Sox2P48432 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.56□□□□□ -0.08
Sox2P48432 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.56□□□□□ -0.08
Sox2P48432 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox2P48432 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox2P48432 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Sox2P48432 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox2P48432 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox2P48432 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox2P48432 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox2P48432 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox2P48432 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.56□□□□□ -0.08
Sox2P48432 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sox2P48432 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Sox2P48432 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox2P48432 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms