Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sox6P40645 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox6P40645 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox6P40645 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox6P40645 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox6P40645 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox6P40645 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox6P40645 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sox6P40645 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sox6P40645 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Sox6P40645 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox6P40645 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.61□□□□□ -0.07
Sox6P40645 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sox6P40645 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox6P40645 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sox6P40645 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Sox6P40645 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox6P40645 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox6P40645 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox6P40645 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox6P40645 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox6P40645 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Sox6P40645 Gm14859-201ENSMUST00000117752 357 ntBASIC14.61□□□□□ -0.07
Sox6P40645 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox6P40645 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sox6P40645 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.61□□□□□ -0.07
Sox6P40645 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sox6P40645 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox6P40645 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox6P40645 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox6P40645 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Sox6P40645 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Sox6P40645 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox6P40645 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.61□□□□□ -0.07
Sox6P40645 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.61□□□□□ -0.07
Sox6P40645 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox6P40645 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox6P40645 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Sox6P40645 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox6P40645 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Sox6P40645 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.6□□□□□ -0.07
Sox6P40645 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Sox6P40645 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox6P40645 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox6P40645 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox6P40645 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox6P40645 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Sox6P40645 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.6□□□□□ -0.07
Sox6P40645 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox6P40645 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox6P40645 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.6□□□□□ -0.07
Sox6P40645 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sox6P40645 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox6P40645 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.6□□□□□ -0.07
Sox6P40645 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox6P40645 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox6P40645 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sox6P40645 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sox6P40645 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sox6P40645 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox6P40645 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox6P40645 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox6P40645 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox6P40645 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sox6P40645 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox6P40645 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sox6P40645 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sox6P40645 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Sox6P40645 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox6P40645 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox6P40645 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox6P40645 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.59□□□□□ -0.07
Sox6P40645 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox6P40645 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sox6P40645 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox6P40645 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox6P40645 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox6P40645 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox6P40645 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox6P40645 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox6P40645 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox6P40645 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.59□□□□□ -0.07
Sox6P40645 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.59□□□□□ -0.07
Sox6P40645 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sox6P40645 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.59□□□□□ -0.07
Sox6P40645 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.59□□□□□ -0.07
Sox6P40645 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox6P40645 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox6P40645 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox6P40645 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Sox6P40645 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox6P40645 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox6P40645 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.58□□□□□ -0.07
Sox6P40645 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.58□□□□□ -0.07
Sox6P40645 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sox6P40645 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox6P40645 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox6P40645 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.58□□□□□ -0.08
Sox6P40645 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox6P40645 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms