Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cxcl12P40224 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cxcl12P40224 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cxcl12P40224 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Cxcl12P40224 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cxcl12P40224 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cxcl12P40224 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cxcl12P40224 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cxcl12P40224 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cxcl12P40224 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cxcl12P40224 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Cxcl12P40224 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.94■□□□□ 0.14
Cxcl12P40224 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cxcl12P40224 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cxcl12P40224 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cxcl12P40224 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cxcl12P40224 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Cxcl12P40224 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Cxcl12P40224 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cxcl12P40224 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cxcl12P40224 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cxcl12P40224 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cxcl12P40224 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cxcl12P40224 Gm14767-201ENSMUST00000121559 586 ntBASIC15.93■□□□□ 0.14
Cxcl12P40224 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cxcl12P40224 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cxcl12P40224 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.93■□□□□ 0.14
Cxcl12P40224 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cxcl12P40224 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cxcl12P40224 AC124732.1-201ENSMUST00000221551 910 ntBASIC15.93■□□□□ 0.14
Cxcl12P40224 Cdk7-205ENSMUST00000225990 1159 ntBASIC15.93■□□□□ 0.14
Cxcl12P40224 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cxcl12P40224 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cxcl12P40224 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Cxcl12P40224 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Cxcl12P40224 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Cxcl12P40224 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Cxcl12P40224 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cxcl12P40224 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cxcl12P40224 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cxcl12P40224 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.93■□□□□ 0.14
Cxcl12P40224 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cxcl12P40224 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cxcl12P40224 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cxcl12P40224 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cxcl12P40224 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cxcl12P40224 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Cxcl12P40224 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cxcl12P40224 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cxcl12P40224 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cxcl12P40224 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cxcl12P40224 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cxcl12P40224 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.92■□□□□ 0.14
Cxcl12P40224 Gm14719-201ENSMUST00000121891 340 ntBASIC15.92■□□□□ 0.14
Cxcl12P40224 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cxcl12P40224 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC15.92■□□□□ 0.14
Cxcl12P40224 Gm28631-201ENSMUST00000190740 334 ntBASIC15.92■□□□□ 0.14
Cxcl12P40224 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.92■□□□□ 0.14
Cxcl12P40224 Gm18049-201ENSMUST00000208909 581 ntBASIC15.92■□□□□ 0.14
Cxcl12P40224 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.92■□□□□ 0.14
Cxcl12P40224 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cxcl12P40224 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cxcl12P40224 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.92■□□□□ 0.14
Cxcl12P40224 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cxcl12P40224 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cxcl12P40224 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Cxcl12P40224 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cxcl12P40224 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cxcl12P40224 Syt7-204ENSMUST00000223586 1344 ntBASIC15.92■□□□□ 0.14
Cxcl12P40224 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cxcl12P40224 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cxcl12P40224 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cxcl12P40224 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
Cxcl12P40224 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cxcl12P40224 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cxcl12P40224 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cxcl12P40224 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Cxcl12P40224 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cxcl12P40224 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cxcl12P40224 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cxcl12P40224 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cxcl12P40224 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.91■□□□□ 0.14
Cxcl12P40224 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cxcl12P40224 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC15.91■□□□□ 0.14
Cxcl12P40224 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cxcl12P40224 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC15.91■□□□□ 0.14
Cxcl12P40224 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.91■□□□□ 0.14
Cxcl12P40224 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cxcl12P40224 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cxcl12P40224 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.91■□□□□ 0.14
Cxcl12P40224 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cxcl12P40224 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cxcl12P40224 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cxcl12P40224 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cxcl12P40224 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cxcl12P40224 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Cxcl12P40224 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cxcl12P40224 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cxcl12P40224 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cxcl12P40224 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms