Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.47■□□□□ 0.39
Col2a1P28481 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col2a1P28481 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.46■□□□□ 0.39
Col2a1P28481 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col2a1P28481 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Col2a1P28481 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col2a1P28481 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col2a1P28481 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Col2a1P28481 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Col2a1P28481 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Col2a1P28481 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.46■□□□□ 0.39
Col2a1P28481 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.46■□□□□ 0.39
Col2a1P28481 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col2a1P28481 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col2a1P28481 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col2a1P28481 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col2a1P28481 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col2a1P28481 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col2a1P28481 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Col2a1P28481 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Col2a1P28481 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Col2a1P28481 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Col2a1P28481 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.38
Col2a1P28481 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col2a1P28481 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Col2a1P28481 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col2a1P28481 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col2a1P28481 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col2a1P28481 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col2a1P28481 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col2a1P28481 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col2a1P28481 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col2a1P28481 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col2a1P28481 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.45■□□□□ 0.38
Col2a1P28481 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col2a1P28481 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.45■□□□□ 0.38
Col2a1P28481 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col2a1P28481 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.45■□□□□ 0.38
Col2a1P28481 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col2a1P28481 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col2a1P28481 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col2a1P28481 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.45■□□□□ 0.38
Col2a1P28481 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.45■□□□□ 0.38
Col2a1P28481 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col2a1P28481 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col2a1P28481 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.45■□□□□ 0.38
Col2a1P28481 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col2a1P28481 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col2a1P28481 Dancr-204ENSMUST00000132389 2347 ntBASIC17.45■□□□□ 0.38
Col2a1P28481 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
Col2a1P28481 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col2a1P28481 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col2a1P28481 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col2a1P28481 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col2a1P28481 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col2a1P28481 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col2a1P28481 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col2a1P28481 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col2a1P28481 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col2a1P28481 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col2a1P28481 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Col2a1P28481 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col2a1P28481 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.44■□□□□ 0.38
Col2a1P28481 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col2a1P28481 Gm7774-201ENSMUST00000200064 533 ntBASIC17.44■□□□□ 0.38
Col2a1P28481 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.44■□□□□ 0.38
Col2a1P28481 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.44■□□□□ 0.38
Col2a1P28481 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col2a1P28481 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col2a1P28481 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.44■□□□□ 0.38
Col2a1P28481 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col2a1P28481 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col2a1P28481 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Col2a1P28481 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col2a1P28481 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col2a1P28481 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.44■□□□□ 0.38
Col2a1P28481 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col2a1P28481 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col2a1P28481 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col2a1P28481 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col2a1P28481 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col2a1P28481 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col2a1P28481 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col2a1P28481 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.44■□□□□ 0.38
Col2a1P28481 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.44■□□□□ 0.38
Col2a1P28481 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col2a1P28481 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col2a1P28481 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col2a1P28481 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.43■□□□□ 0.38
Col2a1P28481 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col2a1P28481 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col2a1P28481 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col2a1P28481 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col2a1P28481 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col2a1P28481 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.43■□□□□ 0.38
Col2a1P28481 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.43■□□□□ 0.38
Col2a1P28481 AA543401-201ENSMUST00000164248 1269 ntBASIC17.43■□□□□ 0.38
Col2a1P28481 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Col2a1P28481 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col2a1P28481 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms