Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40P27512 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40P27512 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40P27512 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40P27512 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40P27512 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40P27512 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.04□□□□□ -0.16
Cd40P27512 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40P27512 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.04□□□□□ -0.16
Cd40P27512 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40P27512 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cd40P27512 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40P27512 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.04□□□□□ -0.16
Cd40P27512 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cd40P27512 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Cd40P27512 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40P27512 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40P27512 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.04□□□□□ -0.16
Cd40P27512 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40P27512 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40P27512 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40P27512 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40P27512 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40P27512 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40P27512 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40P27512 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40P27512 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cd40P27512 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40P27512 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40P27512 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Cd40P27512 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40P27512 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cd40P27512 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40P27512 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Cd40P27512 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40P27512 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40P27512 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40P27512 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cd40P27512 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.03□□□□□ -0.16
Cd40P27512 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40P27512 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.03□□□□□ -0.16
Cd40P27512 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40P27512 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40P27512 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40P27512 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40P27512 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40P27512 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.03□□□□□ -0.16
Cd40P27512 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40P27512 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40P27512 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40P27512 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40P27512 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40P27512 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cd40P27512 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40P27512 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40P27512 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40P27512 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd40P27512 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.03□□□□□ -0.16
Cd40P27512 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cd40P27512 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cd40P27512 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Cd40P27512 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cd40P27512 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cd40P27512 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Cd40P27512 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cd40P27512 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cd40P27512 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cd40P27512 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cd40P27512 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cd40P27512 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cd40P27512 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cd40P27512 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Cd40P27512 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cd40P27512 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cd40P27512 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cd40P27512 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.02□□□□□ -0.17
Cd40P27512 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.02□□□□□ -0.17
Cd40P27512 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cd40P27512 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cd40P27512 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cd40P27512 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Cd40P27512 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cd40P27512 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cd40P27512 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.02□□□□□ -0.17
Cd40P27512 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cd40P27512 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cd40P27512 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cd40P27512 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cd40P27512 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cd40P27512 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cd40P27512 Asic1-205ENSMUST00000228185 1818 ntBASIC14.01□□□□□ -0.17
Cd40P27512 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd40P27512 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd40P27512 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.01□□□□□ -0.17
Cd40P27512 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd40P27512 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd40P27512 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd40P27512 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.01□□□□□ -0.17
Cd40P27512 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd40P27512 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms