Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col8a2P25318 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col8a2P25318 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col8a2P25318 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col8a2P25318 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Col8a2P25318 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col8a2P25318 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col8a2P25318 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col8a2P25318 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Col8a2P25318 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col8a2P25318 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col8a2P25318 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Col8a2P25318 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col8a2P25318 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col8a2P25318 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.95□□□□□ -0.34
Col8a2P25318 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col8a2P25318 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col8a2P25318 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.95□□□□□ -0.34
Col8a2P25318 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Col8a2P25318 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Col8a2P25318 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Col8a2P25318 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col8a2P25318 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col8a2P25318 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col8a2P25318 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col8a2P25318 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col8a2P25318 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col8a2P25318 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
Col8a2P25318 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.95□□□□□ -0.34
Col8a2P25318 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
Col8a2P25318 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col8a2P25318 Gm14140-201ENSMUST00000119999 995 ntBASIC12.95□□□□□ -0.34
Col8a2P25318 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Col8a2P25318 Gm5264-201ENSMUST00000190584 848 ntBASIC12.95□□□□□ -0.34
Col8a2P25318 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col8a2P25318 Gm19164-201ENSMUST00000210667 640 ntBASIC12.95□□□□□ -0.34
Col8a2P25318 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Col8a2P25318 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col8a2P25318 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col8a2P25318 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col8a2P25318 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col8a2P25318 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col8a2P25318 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col8a2P25318 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col8a2P25318 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col8a2P25318 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Col8a2P25318 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col8a2P25318 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col8a2P25318 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col8a2P25318 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col8a2P25318 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col8a2P25318 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Col8a2P25318 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col8a2P25318 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col8a2P25318 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.94□□□□□ -0.34
Col8a2P25318 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col8a2P25318 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col8a2P25318 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col8a2P25318 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col8a2P25318 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC12.94□□□□□ -0.34
Col8a2P25318 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col8a2P25318 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col8a2P25318 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.94□□□□□ -0.34
Col8a2P25318 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.94□□□□□ -0.34
Col8a2P25318 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col8a2P25318 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Col8a2P25318 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col8a2P25318 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col8a2P25318 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col8a2P25318 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col8a2P25318 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.94□□□□□ -0.34
Col8a2P25318 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col8a2P25318 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.94□□□□□ -0.34
Col8a2P25318 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Col8a2P25318 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.94□□□□□ -0.34
Col8a2P25318 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col8a2P25318 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col8a2P25318 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.94□□□□□ -0.34
Col8a2P25318 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col8a2P25318 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.93□□□□□ -0.34
Col8a2P25318 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col8a2P25318 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col8a2P25318 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col8a2P25318 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col8a2P25318 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col8a2P25318 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Col8a2P25318 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col8a2P25318 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Col8a2P25318 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col8a2P25318 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col8a2P25318 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col8a2P25318 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col8a2P25318 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.93□□□□□ -0.34
Col8a2P25318 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col8a2P25318 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.93□□□□□ -0.34
Col8a2P25318 Gm14494-201ENSMUST00000118786 435 ntBASIC12.93□□□□□ -0.34
Col8a2P25318 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col8a2P25318 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col8a2P25318 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col8a2P25318 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms