Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Hmga1P17095 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Hmga1P17095 Gm26308-201ENSMUST00000157768 69 ntBASIC15.81■□□□□ 0.12
Hmga1P17095 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Hmga1P17095 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmga1P17095 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmga1P17095 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.81■□□□□ 0.12
Hmga1P17095 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmga1P17095 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmga1P17095 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmga1P17095 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmga1P17095 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Hmga1P17095 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Hmga1P17095 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmga1P17095 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmga1P17095 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmga1P17095 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Hmga1P17095 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmga1P17095 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.8■□□□□ 0.12
Hmga1P17095 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmga1P17095 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmga1P17095 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmga1P17095 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Hmga1P17095 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.8■□□□□ 0.12
Hmga1P17095 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hmga1P17095 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmga1P17095 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmga1P17095 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmga1P17095 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Hmga1P17095 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmga1P17095 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.8■□□□□ 0.12
Hmga1P17095 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmga1P17095 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmga1P17095 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmga1P17095 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Hmga1P17095 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Hmga1P17095 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hmga1P17095 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmga1P17095 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmga1P17095 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmga1P17095 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmga1P17095 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmga1P17095 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hmga1P17095 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Hmga1P17095 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmga1P17095 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmga1P17095 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmga1P17095 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmga1P17095 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmga1P17095 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmga1P17095 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Hmga1P17095 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Hmga1P17095 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.79■□□□□ 0.12
Hmga1P17095 Gm16198-201ENSMUST00000118766 670 ntBASIC15.79■□□□□ 0.12
Hmga1P17095 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.79■□□□□ 0.12
Hmga1P17095 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.79■□□□□ 0.12
Hmga1P17095 Gm25925-201ENSMUST00000158314 306 ntBASIC15.79■□□□□ 0.12
Hmga1P17095 Gm20553-201ENSMUST00000204205 844 ntBASIC15.79■□□□□ 0.12
Hmga1P17095 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.79■□□□□ 0.12
Hmga1P17095 Gm45612-201ENSMUST00000211320 160 ntBASIC15.79■□□□□ 0.12
Hmga1P17095 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.79■□□□□ 0.12
Hmga1P17095 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmga1P17095 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hmga1P17095 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmga1P17095 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hmga1P17095 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hmga1P17095 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmga1P17095 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmga1P17095 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Hmga1P17095 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
Hmga1P17095 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Hmga1P17095 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmga1P17095 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.78■□□□□ 0.12
Hmga1P17095 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.78■□□□□ 0.12
Hmga1P17095 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.78■□□□□ 0.12
Hmga1P17095 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hmga1P17095 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Hmga1P17095 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmga1P17095 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmga1P17095 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmga1P17095 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmga1P17095 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Hmga1P17095 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmga1P17095 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmga1P17095 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmga1P17095 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmga1P17095 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmga1P17095 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Hmga1P17095 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.77■□□□□ 0.12
Hmga1P17095 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Hmga1P17095 Gm9385-201ENSMUST00000117563 472 ntBASIC15.77■□□□□ 0.12
Hmga1P17095 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.77■□□□□ 0.12
Hmga1P17095 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Hmga1P17095 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Hmga1P17095 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.77■□□□□ 0.12
Hmga1P17095 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.77■□□□□ 0.12
Hmga1P17095 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Hmga1P17095 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmga1P17095 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmga1P17095 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms