Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxc9P09633 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxc9P09633 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxc9P09633 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxc9P09633 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxc9P09633 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.03■□□□□ 0.8
Hoxc9P09633 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxc9P09633 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Hoxc9P09633 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxc9P09633 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxc9P09633 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC20.03■□□□□ 0.8
Hoxc9P09633 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxc9P09633 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxc9P09633 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC20.03■□□□□ 0.8
Hoxc9P09633 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxc9P09633 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxc9P09633 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC20.03■□□□□ 0.8
Hoxc9P09633 Gm5779-201ENSMUST00000218467 910 ntBASIC20.03■□□□□ 0.8
Hoxc9P09633 AC126408.1-201ENSMUST00000225184 523 ntBASIC20.03■□□□□ 0.8
Hoxc9P09633 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxc9P09633 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxc9P09633 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Hoxc9P09633 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxc9P09633 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Hoxc9P09633 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxc9P09633 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxc9P09633 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hoxc9P09633 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
Hoxc9P09633 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hoxc9P09633 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hoxc9P09633 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Hoxc9P09633 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Hoxc9P09633 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Hoxc9P09633 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC20.02■□□□□ 0.8
Hoxc9P09633 Gm27622-201ENSMUST00000183779 60 ntBASIC20.02■□□□□ 0.8
Hoxc9P09633 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hoxc9P09633 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hoxc9P09633 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC20.02■□□□□ 0.8
Hoxc9P09633 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Hoxc9P09633 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Hoxc9P09633 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Hoxc9P09633 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hoxc9P09633 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hoxc9P09633 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hoxc9P09633 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Hoxc9P09633 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Hoxc9P09633 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC20.02■□□□□ 0.79
Hoxc9P09633 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC20.01■□□□□ 0.79
Hoxc9P09633 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxc9P09633 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxc9P09633 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.01■□□□□ 0.79
Hoxc9P09633 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxc9P09633 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC20.01■□□□□ 0.79
Hoxc9P09633 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC20.01■□□□□ 0.79
Hoxc9P09633 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC20.01■□□□□ 0.79
Hoxc9P09633 Gm16026-204ENSMUST00000162652 683 ntBASIC20.01■□□□□ 0.79
Hoxc9P09633 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC20.01■□□□□ 0.79
Hoxc9P09633 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxc9P09633 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxc9P09633 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxc9P09633 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxc9P09633 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Hoxc9P09633 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxc9P09633 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Hoxc9P09633 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC20.01■□□□□ 0.79
Hoxc9P09633 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxc9P09633 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxc9P09633 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxc9P09633 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxc9P09633 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxc9P09633 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Hoxc9P09633 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hoxc9P09633 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC20■□□□□ 0.79
Hoxc9P09633 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hoxc9P09633 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Hoxc9P09633 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC20■□□□□ 0.79
Hoxc9P09633 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC20■□□□□ 0.79
Hoxc9P09633 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hoxc9P09633 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hoxc9P09633 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC20■□□□□ 0.79
Hoxc9P09633 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Hoxc9P09633 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC20■□□□□ 0.79
Hoxc9P09633 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hoxc9P09633 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC20■□□□□ 0.79
Hoxc9P09633 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hoxc9P09633 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hoxc9P09633 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Hoxc9P09633 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Hoxc9P09633 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Hoxc9P09633 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Hoxc9P09633 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC20■□□□□ 0.79
Hoxc9P09633 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Hoxc9P09633 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Hoxc9P09633 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxc9P09633 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Hoxc9P09633 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxc9P09633 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxc9P09633 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxc9P09633 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Hoxc9P09633 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms