Protein–RNA interactions for Protein: P08551

Nefl, Neurofilament light polypeptide, mousemouse

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NeflP08551 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NeflP08551 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC20.23■□□□□ 0.83
NeflP08551 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NeflP08551 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NeflP08551 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NeflP08551 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NeflP08551 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC20.22■□□□□ 0.83
NeflP08551 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
NeflP08551 Gm10584-201ENSMUST00000207036 2628 ntBASIC20.22■□□□□ 0.83
NeflP08551 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NeflP08551 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.22■□□□□ 0.83
NeflP08551 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC20.22■□□□□ 0.83
NeflP08551 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NeflP08551 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
NeflP08551 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC20.22■□□□□ 0.83
NeflP08551 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NeflP08551 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NeflP08551 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
NeflP08551 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
NeflP08551 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NeflP08551 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NeflP08551 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NeflP08551 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NeflP08551 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NeflP08551 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
NeflP08551 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
NeflP08551 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NeflP08551 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NeflP08551 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
NeflP08551 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NeflP08551 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NeflP08551 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NeflP08551 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NeflP08551 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
NeflP08551 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
NeflP08551 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NeflP08551 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC20.21■□□□□ 0.83
NeflP08551 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NeflP08551 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC20.21■□□□□ 0.83
NeflP08551 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NeflP08551 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NeflP08551 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NeflP08551 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
NeflP08551 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
NeflP08551 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NeflP08551 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NeflP08551 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NeflP08551 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NeflP08551 Gm7889-201ENSMUST00000185591 958 ntBASIC20.2■□□□□ 0.82
NeflP08551 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.2■□□□□ 0.82
NeflP08551 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NeflP08551 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NeflP08551 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NeflP08551 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
NeflP08551 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NeflP08551 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
NeflP08551 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NeflP08551 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NeflP08551 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NeflP08551 BC037039-201ENSMUST00000192003 2205 ntBASIC20.2■□□□□ 0.82
NeflP08551 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NeflP08551 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NeflP08551 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NeflP08551 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NeflP08551 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC20.2■□□□□ 0.82
NeflP08551 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NeflP08551 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
NeflP08551 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC20.19■□□□□ 0.82
NeflP08551 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NeflP08551 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NeflP08551 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC20.19■□□□□ 0.82
NeflP08551 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC20.19■□□□□ 0.82
NeflP08551 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
NeflP08551 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NeflP08551 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NeflP08551 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
NeflP08551 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
NeflP08551 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NeflP08551 Gm6257-201ENSMUST00000163864 910 ntBASIC20.19■□□□□ 0.82
NeflP08551 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
NeflP08551 Gm27011-201ENSMUST00000182352 972 ntBASIC20.19■□□□□ 0.82
NeflP08551 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.19■□□□□ 0.82
NeflP08551 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
NeflP08551 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
NeflP08551 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
NeflP08551 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NeflP08551 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NeflP08551 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NeflP08551 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NeflP08551 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
NeflP08551 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
NeflP08551 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
NeflP08551 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NeflP08551 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
NeflP08551 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NeflP08551 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
NeflP08551 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NeflP08551 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
NeflP08551 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC20.18■□□□□ 0.82
NeflP08551 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms