Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gm5364-201ENSMUST00000216789 889 ntBASIC13.02□□□□□ -0.33
Hoxa3P02831 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxa3P02831 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxa3P02831 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.02□□□□□ -0.33
Hoxa3P02831 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxa3P02831 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Hoxa3P02831 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.02□□□□□ -0.33
Hoxa3P02831 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Hoxa3P02831 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Hoxa3P02831 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxa3P02831 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
Hoxa3P02831 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Hoxa3P02831 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa3P02831 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa3P02831 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa3P02831 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Hoxa3P02831 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa3P02831 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa3P02831 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa3P02831 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa3P02831 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa3P02831 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.01□□□□□ -0.33
Hoxa3P02831 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.01□□□□□ -0.33
Hoxa3P02831 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa3P02831 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Hoxa3P02831 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
Hoxa3P02831 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.01□□□□□ -0.33
Hoxa3P02831 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.01□□□□□ -0.33
Hoxa3P02831 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.01□□□□□ -0.33
Hoxa3P02831 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.01□□□□□ -0.33
Hoxa3P02831 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Hoxa3P02831 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.01□□□□□ -0.33
Hoxa3P02831 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa3P02831 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Hoxa3P02831 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.01□□□□□ -0.33
Hoxa3P02831 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.01□□□□□ -0.33
Hoxa3P02831 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.01□□□□□ -0.33
Hoxa3P02831 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.01□□□□□ -0.33
Hoxa3P02831 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa3P02831 Gm8825-201ENSMUST00000182565 998 ntBASIC13.01□□□□□ -0.33
Hoxa3P02831 Gm4518-201ENSMUST00000182638 718 ntBASIC13.01□□□□□ -0.33
Hoxa3P02831 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.01□□□□□ -0.33
Hoxa3P02831 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.01□□□□□ -0.33
Hoxa3P02831 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.01□□□□□ -0.33
Hoxa3P02831 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.01□□□□□ -0.33
Hoxa3P02831 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.01□□□□□ -0.33
Hoxa3P02831 AV026068-213ENSMUST00000223675 1171 ntBASIC13.01□□□□□ -0.33
Hoxa3P02831 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Hoxa3P02831 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.01□□□□□ -0.33
Hoxa3P02831 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.01□□□□□ -0.33
Hoxa3P02831 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa3P02831 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.01□□□□□ -0.33
Hoxa3P02831 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa3P02831 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa3P02831 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.01□□□□□ -0.33
Hoxa3P02831 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.01□□□□□ -0.33
Hoxa3P02831 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa3P02831 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa3P02831 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa3P02831 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa3P02831 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa3P02831 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Hoxa3P02831 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxa3P02831 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxa3P02831 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxa3P02831 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Hoxa3P02831 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13□□□□□ -0.33
Hoxa3P02831 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxa3P02831 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Hoxa3P02831 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxa3P02831 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Hoxa3P02831 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13□□□□□ -0.33
Hoxa3P02831 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hoxa3P02831 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hoxa3P02831 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxa3P02831 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxa3P02831 Gm14026-201ENSMUST00000120625 1789 ntBASIC13□□□□□ -0.33
Hoxa3P02831 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hoxa3P02831 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxa3P02831 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxa3P02831 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13□□□□□ -0.33
Hoxa3P02831 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hoxa3P02831 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxa3P02831 Gm3928-201ENSMUST00000121141 1307 ntBASIC13□□□□□ -0.33
Hoxa3P02831 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13□□□□□ -0.33
Hoxa3P02831 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Hoxa3P02831 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13□□□□□ -0.33
Hoxa3P02831 Gm27646-201ENSMUST00000183989 110 ntBASIC13□□□□□ -0.33
Hoxa3P02831 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13□□□□□ -0.33
Hoxa3P02831 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13□□□□□ -0.33
Hoxa3P02831 AC117588.1-201ENSMUST00000228510 999 ntBASIC13□□□□□ -0.33
Hoxa3P02831 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxa3P02831 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Hoxa3P02831 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxa3P02831 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxa3P02831 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxa3P02831 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13□□□□□ -0.33
Hoxa3P02831 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13□□□□□ -0.33
Hoxa3P02831 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Hoxa3P02831 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms