Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC11.37□□□□□ -0.59
TcraP01849 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TcraP01849 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TcraP01849 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TcraP01849 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TcraP01849 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TcraP01849 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TcraP01849 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
TcraP01849 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
TcraP01849 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TcraP01849 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TcraP01849 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC11.36□□□□□ -0.59
TcraP01849 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TcraP01849 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TcraP01849 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TcraP01849 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
TcraP01849 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC11.36□□□□□ -0.59
TcraP01849 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
TcraP01849 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TcraP01849 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
TcraP01849 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
TcraP01849 Gm8520-201ENSMUST00000186517 868 ntBASIC11.36□□□□□ -0.59
TcraP01849 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC11.36□□□□□ -0.59
TcraP01849 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TcraP01849 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TcraP01849 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TcraP01849 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
TcraP01849 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
TcraP01849 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TcraP01849 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
TcraP01849 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TcraP01849 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TcraP01849 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
TcraP01849 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TcraP01849 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TcraP01849 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TcraP01849 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TcraP01849 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TcraP01849 Gm10605-202ENSMUST00000183019 3198 ntBASIC11.36□□□□□ -0.59
TcraP01849 Gm45760-201ENSMUST00000212190 1782 ntBASIC11.36□□□□□ -0.59
TcraP01849 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
TcraP01849 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TcraP01849 Phf7-203ENSMUST00000226565 1971 ntBASIC11.36□□□□□ -0.59
TcraP01849 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TcraP01849 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC11.35□□□□□ -0.59
TcraP01849 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TcraP01849 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TcraP01849 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TcraP01849 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TcraP01849 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TcraP01849 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
TcraP01849 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TcraP01849 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
TcraP01849 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TcraP01849 Gm14464-201ENSMUST00000119658 1254 ntBASIC11.35□□□□□ -0.59
TcraP01849 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TcraP01849 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
TcraP01849 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TcraP01849 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC11.35□□□□□ -0.59
TcraP01849 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC11.35□□□□□ -0.59
TcraP01849 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TcraP01849 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TcraP01849 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TcraP01849 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TcraP01849 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC11.35□□□□□ -0.59
TcraP01849 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
TcraP01849 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TcraP01849 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
TcraP01849 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TcraP01849 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC11.35□□□□□ -0.59
TcraP01849 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TcraP01849 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TcraP01849 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TcraP01849 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TcraP01849 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
TcraP01849 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TcraP01849 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TcraP01849 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TcraP01849 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TcraP01849 Mir1199-201ENSMUST00000117015 119 ntBASIC11.34□□□□□ -0.59
TcraP01849 Gm12085-201ENSMUST00000119263 940 ntBASIC11.34□□□□□ -0.59
TcraP01849 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
TcraP01849 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
TcraP01849 AC154649.1-201ENSMUST00000227392 384 ntBASIC11.34□□□□□ -0.59
TcraP01849 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TcraP01849 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TcraP01849 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
TcraP01849 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TcraP01849 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
TcraP01849 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TcraP01849 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
TcraP01849 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
TcraP01849 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
TcraP01849 Actl10-202ENSMUST00000226583 1501 ntBASIC11.34□□□□□ -0.59
TcraP01849 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TcraP01849 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
TcraP01849 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TcraP01849 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TcraP01849 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
TcraP01849 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms