Protein–RNA interactions for Protein: O88746

Tom1, Target of Myb protein 1, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tom1O88746 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tom1O88746 CT030657.3-201ENSMUST00000222707 1200 ntBASIC20.41■□□□□ 0.86
Tom1O88746 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tom1O88746 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tom1O88746 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tom1O88746 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tom1O88746 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tom1O88746 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tom1O88746 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tom1O88746 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tom1O88746 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tom1O88746 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Tom1O88746 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tom1O88746 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tom1O88746 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tom1O88746 Haglr-201ENSMUST00000100000 2085 ntBASIC20.4■□□□□ 0.86
Tom1O88746 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tom1O88746 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tom1O88746 Gm13392-201ENSMUST00000117708 150 ntBASIC20.4■□□□□ 0.86
Tom1O88746 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tom1O88746 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tom1O88746 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Tom1O88746 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tom1O88746 Gm42693-201ENSMUST00000196779 631 ntBASIC20.4■□□□□ 0.86
Tom1O88746 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tom1O88746 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tom1O88746 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tom1O88746 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Tom1O88746 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tom1O88746 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.4■□□□□ 0.86
Tom1O88746 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC20.4■□□□□ 0.86
Tom1O88746 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tom1O88746 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tom1O88746 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tom1O88746 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tom1O88746 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tom1O88746 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tom1O88746 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tom1O88746 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tom1O88746 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tom1O88746 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tom1O88746 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Tom1O88746 Gm3436-201ENSMUST00000179930 840 ntBASIC20.39■□□□□ 0.85
Tom1O88746 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC20.39■□□□□ 0.85
Tom1O88746 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC20.39■□□□□ 0.85
Tom1O88746 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC20.39■□□□□ 0.85
Tom1O88746 AC159006.1-201ENSMUST00000226396 258 ntBASIC20.39■□□□□ 0.85
Tom1O88746 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Tom1O88746 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC20.39■□□□□ 0.85
Tom1O88746 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Tom1O88746 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tom1O88746 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Tom1O88746 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tom1O88746 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tom1O88746 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tom1O88746 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tom1O88746 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tom1O88746 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tom1O88746 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Tom1O88746 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tom1O88746 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC20.38■□□□□ 0.85
Tom1O88746 Trav4d-2-201ENSMUST00000120914 335 ntBASIC20.38■□□□□ 0.85
Tom1O88746 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tom1O88746 Gm28760-201ENSMUST00000185995 736 ntBASIC20.38■□□□□ 0.85
Tom1O88746 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tom1O88746 Gm10766-202ENSMUST00000194123 606 ntBASIC20.38■□□□□ 0.85
Tom1O88746 AC159896.2-201ENSMUST00000214753 269 ntBASIC20.38■□□□□ 0.85
Tom1O88746 AC154319.1-201ENSMUST00000216330 312 ntBASIC20.38■□□□□ 0.85
Tom1O88746 AL589735.1-201ENSMUST00000224353 270 ntBASIC20.38■□□□□ 0.85
Tom1O88746 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Tom1O88746 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tom1O88746 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC20.38■□□□□ 0.85
Tom1O88746 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tom1O88746 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tom1O88746 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.38■□□□□ 0.85
Tom1O88746 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tom1O88746 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tom1O88746 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Tom1O88746 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tom1O88746 Gm15198-201ENSMUST00000117283 177 ntBASIC20.37■□□□□ 0.85
Tom1O88746 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC20.37■□□□□ 0.85
Tom1O88746 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tom1O88746 Klk2-ps-201ENSMUST00000205342 571 ntBASIC20.37■□□□□ 0.85
Tom1O88746 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC20.37■□□□□ 0.85
Tom1O88746 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tom1O88746 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Tom1O88746 Olfr582-201ENSMUST00000098212 960 ntBASIC20.37■□□□□ 0.85
Tom1O88746 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tom1O88746 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tom1O88746 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tom1O88746 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Tom1O88746 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC20.37■□□□□ 0.85
Tom1O88746 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tom1O88746 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tom1O88746 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tom1O88746 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tom1O88746 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Tom1O88746 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tom1O88746 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tom1O88746 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms