Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.89■□□□□ 0.62
Cops6O88545 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.89■□□□□ 0.61
Cops6O88545 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cops6O88545 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Cops6O88545 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cops6O88545 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Cops6O88545 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cops6O88545 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cops6O88545 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC18.89■□□□□ 0.61
Cops6O88545 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC18.89■□□□□ 0.61
Cops6O88545 Gm5628-201ENSMUST00000222318 1049 ntBASIC18.89■□□□□ 0.61
Cops6O88545 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC18.89■□□□□ 0.61
Cops6O88545 Gpr146-202ENSMUST00000053120 1040 ntBASIC18.89■□□□□ 0.61
Cops6O88545 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cops6O88545 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18.89■□□□□ 0.61
Cops6O88545 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cops6O88545 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.89■□□□□ 0.61
Cops6O88545 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cops6O88545 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cops6O88545 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cops6O88545 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cops6O88545 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cops6O88545 Gm37171-201ENSMUST00000192636 1185 ntBASIC18.88■□□□□ 0.61
Cops6O88545 Gm2272-201ENSMUST00000194903 582 ntBASIC18.88■□□□□ 0.61
Cops6O88545 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC18.88■□□□□ 0.61
Cops6O88545 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC18.88■□□□□ 0.61
Cops6O88545 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC18.88■□□□□ 0.61
Cops6O88545 AC139382.1-201ENSMUST00000221402 498 ntBASIC18.88■□□□□ 0.61
Cops6O88545 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cops6O88545 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cops6O88545 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cops6O88545 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cops6O88545 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cops6O88545 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cops6O88545 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cops6O88545 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cops6O88545 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Cops6O88545 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cops6O88545 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cops6O88545 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Cops6O88545 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cops6O88545 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cops6O88545 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cops6O88545 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cops6O88545 Gm13410-201ENSMUST00000117058 1415 ntBASIC18.87■□□□□ 0.61
Cops6O88545 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cops6O88545 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cops6O88545 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cops6O88545 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cops6O88545 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.87■□□□□ 0.61
Cops6O88545 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC18.87■□□□□ 0.61
Cops6O88545 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.87■□□□□ 0.61
Cops6O88545 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cops6O88545 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cops6O88545 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cops6O88545 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cops6O88545 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Cops6O88545 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cops6O88545 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Cops6O88545 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Cops6O88545 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cops6O88545 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Cops6O88545 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cops6O88545 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cops6O88545 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cops6O88545 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Cops6O88545 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Cops6O88545 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cops6O88545 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cops6O88545 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
Cops6O88545 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cops6O88545 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC18.86■□□□□ 0.61
Cops6O88545 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cops6O88545 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC18.86■□□□□ 0.61
Cops6O88545 Gm5312-201ENSMUST00000203728 547 ntBASIC18.86■□□□□ 0.61
Cops6O88545 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cops6O88545 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Cops6O88545 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cops6O88545 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cops6O88545 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cops6O88545 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cops6O88545 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.86■□□□□ 0.61
Cops6O88545 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cops6O88545 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.86■□□□□ 0.61
Cops6O88545 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cops6O88545 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cops6O88545 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Cops6O88545 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cops6O88545 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cops6O88545 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cops6O88545 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cops6O88545 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Cops6O88545 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Cops6O88545 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cops6O88545 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cops6O88545 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.85■□□□□ 0.61
Cops6O88545 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cops6O88545 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cops6O88545 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC18.85■□□□□ 0.61
Cops6O88545 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms