Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Gm10139O88245 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Gm10139O88245 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Gm10139O88245 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Gm10139O88245 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Gm10139O88245 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Gm10139O88245 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Gm10139O88245 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Gm10139O88245 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Gm10139O88245 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Gm10139O88245 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC9.47□□□□□ -0.89
Gm10139O88245 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Gm10139O88245 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Gm10139O88245 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Gm10139O88245 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Gm10139O88245 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Gm10139O88245 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Gm10139O88245 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC9.46□□□□□ -0.89
Gm10139O88245 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Gm10139O88245 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Gm10139O88245 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Gm10139O88245 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Gm10139O88245 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Gm10139O88245 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Gm10139O88245 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Gm10139O88245 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Gm10139O88245 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Gm10139O88245 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Gm10139O88245 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Gm10139O88245 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Gm10139O88245 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC9.46□□□□□ -0.9
Gm10139O88245 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Gm10139O88245 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.9
Gm10139O88245 Gm44454-201ENSMUST00000198541 138 ntBASIC9.46□□□□□ -0.9
Gm10139O88245 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Gm10139O88245 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Gm10139O88245 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Gm10139O88245 AC160980.1-201ENSMUST00000224136 970 ntBASIC9.46□□□□□ -0.9
Gm10139O88245 Vti1a-206ENSMUST00000225529 1244 ntBASIC9.46□□□□□ -0.9
Gm10139O88245 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Gm10139O88245 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Gm10139O88245 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC9.46□□□□□ -0.9
Gm10139O88245 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Gm10139O88245 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Gm10139O88245 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Gm10139O88245 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Gm10139O88245 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Gm10139O88245 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Gm10139O88245 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Gm10139O88245 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Gm10139O88245 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
Gm10139O88245 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Gm10139O88245 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Gm10139O88245 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Gm10139O88245 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Gm10139O88245 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Gm10139O88245 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Gm10139O88245 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Gm10139O88245 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Gm10139O88245 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Gm10139O88245 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10139O88245 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10139O88245 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10139O88245 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10139O88245 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
Gm10139O88245 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10139O88245 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10139O88245 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10139O88245 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10139O88245 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10139O88245 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10139O88245 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10139O88245 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10139O88245 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10139O88245 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Gm10139O88245 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10139O88245 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Gm10139O88245 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10139O88245 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10139O88245 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC9.45□□□□□ -0.9
Gm10139O88245 Gm23634-201ENSMUST00000175071 91 ntBASIC9.45□□□□□ -0.9
Gm10139O88245 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC9.45□□□□□ -0.9
Gm10139O88245 Gm19164-201ENSMUST00000210667 640 ntBASIC9.45□□□□□ -0.9
Gm10139O88245 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10139O88245 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Gm10139O88245 AC117588.1-201ENSMUST00000228510 999 ntBASIC9.45□□□□□ -0.9
Gm10139O88245 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10139O88245 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10139O88245 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC9.45□□□□□ -0.9
Gm10139O88245 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10139O88245 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10139O88245 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10139O88245 Sybu-209ENSMUST00000228639 4113 ntBASIC9.45□□□□□ -0.9
Gm10139O88245 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10139O88245 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Gm10139O88245 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10139O88245 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC9.45□□□□□ -0.9
Gm10139O88245 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10139O88245 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10139O88245 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms