Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smarce1O54941 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smarce1O54941 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smarce1O54941 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.48■□□□□ 0.55
Smarce1O54941 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.48■□□□□ 0.55
Smarce1O54941 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.48■□□□□ 0.55
Smarce1O54941 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smarce1O54941 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smarce1O54941 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smarce1O54941 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.48■□□□□ 0.55
Smarce1O54941 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Smarce1O54941 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smarce1O54941 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smarce1O54941 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.48■□□□□ 0.55
Smarce1O54941 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC18.47■□□□□ 0.55
Smarce1O54941 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smarce1O54941 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smarce1O54941 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smarce1O54941 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Smarce1O54941 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smarce1O54941 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Smarce1O54941 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.47■□□□□ 0.55
Smarce1O54941 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Smarce1O54941 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.47■□□□□ 0.55
Smarce1O54941 Gm17808-201ENSMUST00000200859 894 ntBASIC18.47■□□□□ 0.55
Smarce1O54941 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.47■□□□□ 0.55
Smarce1O54941 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smarce1O54941 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smarce1O54941 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smarce1O54941 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Smarce1O54941 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Smarce1O54941 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smarce1O54941 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Smarce1O54941 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smarce1O54941 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smarce1O54941 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smarce1O54941 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smarce1O54941 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smarce1O54941 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smarce1O54941 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Smarce1O54941 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.46■□□□□ 0.55
Smarce1O54941 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
Smarce1O54941 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smarce1O54941 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smarce1O54941 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Smarce1O54941 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Smarce1O54941 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Smarce1O54941 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.46■□□□□ 0.55
Smarce1O54941 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smarce1O54941 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Smarce1O54941 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smarce1O54941 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smarce1O54941 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smarce1O54941 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smarce1O54941 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smarce1O54941 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Smarce1O54941 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smarce1O54941 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smarce1O54941 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Smarce1O54941 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smarce1O54941 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smarce1O54941 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smarce1O54941 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.54
Smarce1O54941 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Smarce1O54941 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smarce1O54941 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smarce1O54941 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC18.45■□□□□ 0.54
Smarce1O54941 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smarce1O54941 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smarce1O54941 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smarce1O54941 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smarce1O54941 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smarce1O54941 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.45■□□□□ 0.54
Smarce1O54941 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smarce1O54941 Gm15794-201ENSMUST00000120182 631 ntBASIC18.45■□□□□ 0.54
Smarce1O54941 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Smarce1O54941 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Smarce1O54941 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smarce1O54941 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Smarce1O54941 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
Smarce1O54941 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Smarce1O54941 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smarce1O54941 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smarce1O54941 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smarce1O54941 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smarce1O54941 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Smarce1O54941 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smarce1O54941 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smarce1O54941 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC18.45■□□□□ 0.54
Smarce1O54941 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smarce1O54941 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smarce1O54941 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smarce1O54941 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC18.44■□□□□ 0.54
Smarce1O54941 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smarce1O54941 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smarce1O54941 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Smarce1O54941 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC18.44■□□□□ 0.54
Smarce1O54941 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smarce1O54941 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Smarce1O54941 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms