Protein–RNA interactions for Protein: O54907

Tnfsf12, Tumor necrosis factor ligand superfamily member 12, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf12O54907 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf12O54907 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf12O54907 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.79□□□□□ -0.36
Tnfsf12O54907 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf12O54907 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Tnfsf12O54907 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf12O54907 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf12O54907 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf12O54907 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf12O54907 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf12O54907 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Tnfsf12O54907 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf12O54907 Mir3081-201ENSMUST00000175305 84 ntBASIC12.78□□□□□ -0.36
Tnfsf12O54907 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.78□□□□□ -0.36
Tnfsf12O54907 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Tnfsf12O54907 Gm7977-201ENSMUST00000193787 748 ntBASIC12.78□□□□□ -0.36
Tnfsf12O54907 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf12O54907 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.78□□□□□ -0.36
Tnfsf12O54907 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf12O54907 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf12O54907 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf12O54907 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Tnfsf12O54907 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf12O54907 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.78□□□□□ -0.36
Tnfsf12O54907 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf12O54907 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf12O54907 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Tnfsf12O54907 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf12O54907 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf12O54907 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf12O54907 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Tnfsf12O54907 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Tnfsf12O54907 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf12O54907 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Tnfsf12O54907 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf12O54907 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfsf12O54907 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfsf12O54907 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfsf12O54907 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfsf12O54907 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfsf12O54907 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfsf12O54907 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfsf12O54907 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfsf12O54907 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfsf12O54907 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfsf12O54907 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfsf12O54907 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf12O54907 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf12O54907 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf12O54907 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.77□□□□□ -0.37
Tnfsf12O54907 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Tnfsf12O54907 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf12O54907 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf12O54907 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf12O54907 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.77□□□□□ -0.37
Tnfsf12O54907 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf12O54907 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.77□□□□□ -0.37
Tnfsf12O54907 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf12O54907 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.77□□□□□ -0.37
Tnfsf12O54907 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf12O54907 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.77□□□□□ -0.37
Tnfsf12O54907 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf12O54907 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf12O54907 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf12O54907 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf12O54907 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf12O54907 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf12O54907 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf12O54907 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf12O54907 Grk6-207ENSMUST00000225925 2769 ntBASIC12.77□□□□□ -0.37
Tnfsf12O54907 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.77□□□□□ -0.37
Tnfsf12O54907 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf12O54907 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf12O54907 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf12O54907 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf12O54907 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf12O54907 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Tnfsf12O54907 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf12O54907 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf12O54907 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf12O54907 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Tnfsf12O54907 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf12O54907 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.76□□□□□ -0.37
Tnfsf12O54907 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf12O54907 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf12O54907 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Tnfsf12O54907 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf12O54907 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf12O54907 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf12O54907 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf12O54907 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf12O54907 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf12O54907 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf12O54907 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.76□□□□□ -0.37
Tnfsf12O54907 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf12O54907 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf12O54907 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf12O54907 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf12O54907 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf12O54907 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms