Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sptlc1O35704 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Sptlc1O35704 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Sptlc1O35704 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sptlc1O35704 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Sptlc1O35704 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sptlc1O35704 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sptlc1O35704 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sptlc1O35704 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sptlc1O35704 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sptlc1O35704 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Sptlc1O35704 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sptlc1O35704 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sptlc1O35704 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sptlc1O35704 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.97■□□□□ 0.31
Sptlc1O35704 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Sptlc1O35704 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sptlc1O35704 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.97■□□□□ 0.31
Sptlc1O35704 Gm18246-201ENSMUST00000221023 728 ntBASIC16.97■□□□□ 0.31
Sptlc1O35704 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sptlc1O35704 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sptlc1O35704 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sptlc1O35704 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sptlc1O35704 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sptlc1O35704 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sptlc1O35704 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sptlc1O35704 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sptlc1O35704 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sptlc1O35704 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sptlc1O35704 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sptlc1O35704 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sptlc1O35704 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.96■□□□□ 0.31
Sptlc1O35704 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sptlc1O35704 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Sptlc1O35704 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sptlc1O35704 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sptlc1O35704 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.96■□□□□ 0.31
Sptlc1O35704 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sptlc1O35704 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Sptlc1O35704 Gm15427-201ENSMUST00000117288 531 ntBASIC16.96■□□□□ 0.31
Sptlc1O35704 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.96■□□□□ 0.31
Sptlc1O35704 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sptlc1O35704 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sptlc1O35704 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Sptlc1O35704 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sptlc1O35704 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.96■□□□□ 0.31
Sptlc1O35704 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sptlc1O35704 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sptlc1O35704 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.96■□□□□ 0.31
Sptlc1O35704 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sptlc1O35704 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sptlc1O35704 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sptlc1O35704 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sptlc1O35704 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.96■□□□□ 0.31
Sptlc1O35704 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
Sptlc1O35704 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sptlc1O35704 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sptlc1O35704 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Sptlc1O35704 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sptlc1O35704 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sptlc1O35704 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Sptlc1O35704 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sptlc1O35704 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Sptlc1O35704 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sptlc1O35704 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sptlc1O35704 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sptlc1O35704 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Sptlc1O35704 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.95■□□□□ 0.3
Sptlc1O35704 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sptlc1O35704 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sptlc1O35704 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sptlc1O35704 Gm14701-201ENSMUST00000117156 348 ntBASIC16.95■□□□□ 0.3
Sptlc1O35704 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.95■□□□□ 0.3
Sptlc1O35704 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sptlc1O35704 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.95■□□□□ 0.3
Sptlc1O35704 Gm25116-201ENSMUST00000157191 122 ntBASIC16.95■□□□□ 0.3
Sptlc1O35704 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sptlc1O35704 Auts2-212ENSMUST00000178555 309 ntBASIC16.95■□□□□ 0.3
Sptlc1O35704 Gm27494-201ENSMUST00000184735 189 ntBASIC16.95■□□□□ 0.3
Sptlc1O35704 Gm28745-201ENSMUST00000190069 305 ntBASIC16.95■□□□□ 0.3
Sptlc1O35704 Gm8396-201ENSMUST00000057361 823 ntBASIC16.95■□□□□ 0.3
Sptlc1O35704 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sptlc1O35704 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sptlc1O35704 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sptlc1O35704 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Sptlc1O35704 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sptlc1O35704 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sptlc1O35704 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sptlc1O35704 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sptlc1O35704 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sptlc1O35704 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sptlc1O35704 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sptlc1O35704 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sptlc1O35704 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Sptlc1O35704 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sptlc1O35704 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sptlc1O35704 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sptlc1O35704 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sptlc1O35704 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sptlc1O35704 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms