Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trove2O08848 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trove2O08848 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.98■□□□□ 0.15
Trove2O08848 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trove2O08848 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Trove2O08848 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.98■□□□□ 0.15
Trove2O08848 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trove2O08848 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trove2O08848 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.97■□□□□ 0.15
Trove2O08848 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Trove2O08848 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trove2O08848 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Trove2O08848 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trove2O08848 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trove2O08848 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trove2O08848 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trove2O08848 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trove2O08848 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Trove2O08848 Gm21559-201ENSMUST00000220638 855 ntBASIC15.97■□□□□ 0.15
Trove2O08848 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trove2O08848 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trove2O08848 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trove2O08848 Gm8587-201ENSMUST00000076538 843 ntBASIC15.97■□□□□ 0.15
Trove2O08848 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.97■□□□□ 0.15
Trove2O08848 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trove2O08848 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trove2O08848 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trove2O08848 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trove2O08848 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trove2O08848 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trove2O08848 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trove2O08848 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trove2O08848 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trove2O08848 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.97■□□□□ 0.15
Trove2O08848 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trove2O08848 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trove2O08848 BC037039-201ENSMUST00000192003 2205 ntBASIC15.96■□□□□ 0.15
Trove2O08848 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trove2O08848 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trove2O08848 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trove2O08848 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trove2O08848 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.96■□□□□ 0.15
Trove2O08848 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Trove2O08848 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trove2O08848 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trove2O08848 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trove2O08848 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trove2O08848 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trove2O08848 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trove2O08848 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trove2O08848 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trove2O08848 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trove2O08848 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trove2O08848 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
Trove2O08848 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trove2O08848 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trove2O08848 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trove2O08848 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Trove2O08848 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trove2O08848 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trove2O08848 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trove2O08848 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.96■□□□□ 0.15
Trove2O08848 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trove2O08848 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trove2O08848 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trove2O08848 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trove2O08848 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trove2O08848 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trove2O08848 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trove2O08848 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Trove2O08848 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Trove2O08848 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trove2O08848 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trove2O08848 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trove2O08848 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Trove2O08848 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trove2O08848 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.95■□□□□ 0.14
Trove2O08848 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trove2O08848 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trove2O08848 Gm29707-201ENSMUST00000196325 491 ntBASIC15.95■□□□□ 0.14
Trove2O08848 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trove2O08848 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trove2O08848 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trove2O08848 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trove2O08848 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trove2O08848 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trove2O08848 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trove2O08848 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trove2O08848 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trove2O08848 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trove2O08848 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trove2O08848 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trove2O08848 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trove2O08848 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trove2O08848 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trove2O08848 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trove2O08848 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trove2O08848 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trove2O08848 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trove2O08848 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms