Protein–RNA interactions for Protein: J3QP01

Gm5108, Predicted gene 5108, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5108J3QP01 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Gm5108J3QP01 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.55□□□□□ -0.4
Gm5108J3QP01 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm5108J3QP01 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm5108J3QP01 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm5108J3QP01 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm5108J3QP01 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm5108J3QP01 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm5108J3QP01 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Gm5108J3QP01 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gm5108J3QP01 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.54□□□□□ -0.4
Gm5108J3QP01 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm5108J3QP01 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.54□□□□□ -0.4
Gm5108J3QP01 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gm5108J3QP01 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm5108J3QP01 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gm5108J3QP01 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm5108J3QP01 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.54□□□□□ -0.4
Gm5108J3QP01 Gm13186-201ENSMUST00000118031 316 ntBASIC12.54□□□□□ -0.4
Gm5108J3QP01 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.54□□□□□ -0.4
Gm5108J3QP01 Gm11539-201ENSMUST00000119837 557 ntBASIC12.54□□□□□ -0.4
Gm5108J3QP01 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.54□□□□□ -0.4
Gm5108J3QP01 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gm5108J3QP01 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gm5108J3QP01 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC12.54□□□□□ -0.4
Gm5108J3QP01 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.54□□□□□ -0.4
Gm5108J3QP01 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC12.54□□□□□ -0.4
Gm5108J3QP01 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm5108J3QP01 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Gm5108J3QP01 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Gm5108J3QP01 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm5108J3QP01 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm5108J3QP01 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm5108J3QP01 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm5108J3QP01 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm5108J3QP01 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Gm5108J3QP01 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Gm5108J3QP01 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gm5108J3QP01 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm5108J3QP01 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm5108J3QP01 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm5108J3QP01 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
Gm5108J3QP01 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm5108J3QP01 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm5108J3QP01 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.53□□□□□ -0.4
Gm5108J3QP01 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gm5108J3QP01 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm5108J3QP01 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm5108J3QP01 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm5108J3QP01 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm5108J3QP01 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gm5108J3QP01 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.53□□□□□ -0.4
Gm5108J3QP01 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Gm5108J3QP01 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm5108J3QP01 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm5108J3QP01 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Gm5108J3QP01 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gm5108J3QP01 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gm5108J3QP01 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.53□□□□□ -0.4
Gm5108J3QP01 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Gm5108J3QP01 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gm5108J3QP01 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Gm5108J3QP01 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC12.53□□□□□ -0.4
Gm5108J3QP01 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Gm5108J3QP01 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC12.53□□□□□ -0.4
Gm5108J3QP01 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm5108J3QP01 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm5108J3QP01 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm5108J3QP01 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Gm5108J3QP01 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.53□□□□□ -0.4
Gm5108J3QP01 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Gm5108J3QP01 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gm5108J3QP01 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm5108J3QP01 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gm5108J3QP01 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm5108J3QP01 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm5108J3QP01 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Gm5108J3QP01 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gm5108J3QP01 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm5108J3QP01 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gm5108J3QP01 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm5108J3QP01 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm5108J3QP01 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm5108J3QP01 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm5108J3QP01 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm5108J3QP01 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Gm5108J3QP01 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm5108J3QP01 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.4
Gm5108J3QP01 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
Gm5108J3QP01 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm5108J3QP01 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm5108J3QP01 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm5108J3QP01 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm5108J3QP01 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gm5108J3QP01 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gm5108J3QP01 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gm5108J3QP01 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm5108J3QP01 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm5108J3QP01 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm5108J3QP01 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms