Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13d-3J3QMG8 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13d-3J3QMG8 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13d-3J3QMG8 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13d-3J3QMG8 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav13d-3J3QMG8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 Gm43347-201ENSMUST00000200226 580 ntBASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-3J3QMG8 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trav13d-3J3QMG8 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trav13d-3J3QMG8 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.23
Trav13d-3J3QMG8 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Gm27459-201ENSMUST00000184860 107 ntBASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Gm44357-201ENSMUST00000195897 142 ntBASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Gm19658-201ENSMUST00000196231 138 ntBASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Gm44367-201ENSMUST00000196836 138 ntBASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Gm44350-201ENSMUST00000197197 138 ntBASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Gm44390-201ENSMUST00000197533 144 ntBASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Gm44313-201ENSMUST00000198018 138 ntBASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Gm44486-201ENSMUST00000198508 138 ntBASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Gm44314-201ENSMUST00000199263 138 ntBASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Gm44394-201ENSMUST00000199558 138 ntBASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Gm44484-201ENSMUST00000199873 138 ntBASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Gm44466-201ENSMUST00000200264 138 ntBASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Gm44359-201ENSMUST00000200671 138 ntBASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms