Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh1F7BJK1 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh1F7BJK1 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh1F7BJK1 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh1F7BJK1 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh1F7BJK1 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Pcdh1F7BJK1 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh1F7BJK1 Gm5357-201ENSMUST00000212720 1924 ntBASIC14□□□□□ -0.17
Pcdh1F7BJK1 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh1F7BJK1 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh1F7BJK1 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14□□□□□ -0.17
Pcdh1F7BJK1 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Pcdh1F7BJK1 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdh1F7BJK1 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14□□□□□ -0.17
Pcdh1F7BJK1 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdh1F7BJK1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdh1F7BJK1 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Pcdh1F7BJK1 Gm18101-201ENSMUST00000215769 548 ntBASIC14□□□□□ -0.17
Pcdh1F7BJK1 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh1F7BJK1 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh1F7BJK1 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14□□□□□ -0.17
Pcdh1F7BJK1 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh1F7BJK1 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh1F7BJK1 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh1F7BJK1 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh1F7BJK1 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh1F7BJK1 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh1F7BJK1 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh1F7BJK1 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh1F7BJK1 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh1F7BJK1 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Pcdh1F7BJK1 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh1F7BJK1 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.99□□□□□ -0.17
Pcdh1F7BJK1 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh1F7BJK1 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh1F7BJK1 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh1F7BJK1 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh1F7BJK1 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.99□□□□□ -0.17
Pcdh1F7BJK1 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.99□□□□□ -0.17
Pcdh1F7BJK1 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC13.99□□□□□ -0.17
Pcdh1F7BJK1 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.99□□□□□ -0.17
Pcdh1F7BJK1 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Pcdh1F7BJK1 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.99□□□□□ -0.17
Pcdh1F7BJK1 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Pcdh1F7BJK1 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh1F7BJK1 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh1F7BJK1 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh1F7BJK1 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh1F7BJK1 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh1F7BJK1 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh1F7BJK1 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh1F7BJK1 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Pcdh1F7BJK1 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh1F7BJK1 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh1F7BJK1 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Pcdh1F7BJK1 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Pcdh1F7BJK1 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh1F7BJK1 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.99□□□□□ -0.17
Pcdh1F7BJK1 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.99□□□□□ -0.17
Pcdh1F7BJK1 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh1F7BJK1 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.99□□□□□ -0.17
Pcdh1F7BJK1 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh1F7BJK1 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh1F7BJK1 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh1F7BJK1 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
Pcdh1F7BJK1 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh1F7BJK1 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh1F7BJK1 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh1F7BJK1 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh1F7BJK1 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh1F7BJK1 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh1F7BJK1 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh1F7BJK1 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Pcdh1F7BJK1 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Pcdh1F7BJK1 Gm11355-201ENSMUST00000121120 306 ntBASIC13.98□□□□□ -0.17
Pcdh1F7BJK1 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh1F7BJK1 Gm22697-201ENSMUST00000175194 63 ntBASIC13.98□□□□□ -0.17
Pcdh1F7BJK1 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Pcdh1F7BJK1 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh1F7BJK1 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh1F7BJK1 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh1F7BJK1 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh1F7BJK1 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Pcdh1F7BJK1 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh1F7BJK1 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh1F7BJK1 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh1F7BJK1 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Pcdh1F7BJK1 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh1F7BJK1 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Pcdh1F7BJK1 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh1F7BJK1 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh1F7BJK1 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh1F7BJK1 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.97□□□□□ -0.17
Pcdh1F7BJK1 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh1F7BJK1 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh1F7BJK1 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh1F7BJK1 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Pcdh1F7BJK1 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh1F7BJK1 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh1F7BJK1 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms