Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Dchs1E9PVD3 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Dchs1E9PVD3 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Dchs1E9PVD3 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Dchs1E9PVD3 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Dchs1E9PVD3 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Dchs1E9PVD3 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Dchs1E9PVD3 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Dchs1E9PVD3 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Dchs1E9PVD3 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Dchs1E9PVD3 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.63□□□□□ -0.23
Dchs1E9PVD3 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Dchs1E9PVD3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.63□□□□□ -0.23
Dchs1E9PVD3 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Dchs1E9PVD3 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Dchs1E9PVD3 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dchs1E9PVD3 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dchs1E9PVD3 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dchs1E9PVD3 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.62□□□□□ -0.23
Dchs1E9PVD3 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.62□□□□□ -0.23
Dchs1E9PVD3 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Dchs1E9PVD3 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Dchs1E9PVD3 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Dchs1E9PVD3 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Dchs1E9PVD3 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dchs1E9PVD3 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dchs1E9PVD3 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Dchs1E9PVD3 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Dchs1E9PVD3 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dchs1E9PVD3 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.62□□□□□ -0.23
Dchs1E9PVD3 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Dchs1E9PVD3 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.62□□□□□ -0.23
Dchs1E9PVD3 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Dchs1E9PVD3 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Dchs1E9PVD3 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dchs1E9PVD3 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dchs1E9PVD3 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Dchs1E9PVD3 Gm15693-201ENSMUST00000120470 637 ntBASIC13.61□□□□□ -0.23
Dchs1E9PVD3 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.61□□□□□ -0.23
Dchs1E9PVD3 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.61□□□□□ -0.23
Dchs1E9PVD3 Gm17837-201ENSMUST00000186435 985 ntBASIC13.61□□□□□ -0.23
Dchs1E9PVD3 Gm44855-201ENSMUST00000205725 362 ntBASIC13.61□□□□□ -0.23
Dchs1E9PVD3 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Dchs1E9PVD3 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Dchs1E9PVD3 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Dchs1E9PVD3 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Dchs1E9PVD3 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.61□□□□□ -0.23
Dchs1E9PVD3 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Dchs1E9PVD3 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.61□□□□□ -0.23
Dchs1E9PVD3 Gm18489-201ENSMUST00000172565 551 ntBASIC13.61□□□□□ -0.23
Dchs1E9PVD3 Mir8102-201ENSMUST00000184148 139 ntBASIC13.61□□□□□ -0.23
Dchs1E9PVD3 Gm7774-201ENSMUST00000200064 533 ntBASIC13.61□□□□□ -0.23
Dchs1E9PVD3 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.61□□□□□ -0.23
Dchs1E9PVD3 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Dchs1E9PVD3 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Dchs1E9PVD3 Gm19439-201ENSMUST00000198195 2273 ntBASIC13.61□□□□□ -0.23
Dchs1E9PVD3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Dchs1E9PVD3 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Dchs1E9PVD3 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Dchs1E9PVD3 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Dchs1E9PVD3 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.61□□□□□ -0.23
Dchs1E9PVD3 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Dchs1E9PVD3 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Dchs1E9PVD3 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Dchs1E9PVD3 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Dchs1E9PVD3 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Dchs1E9PVD3 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Dchs1E9PVD3 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Dchs1E9PVD3 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Dchs1E9PVD3 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Dchs1E9PVD3 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Dchs1E9PVD3 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.6□□□□□ -0.23
Dchs1E9PVD3 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.6□□□□□ -0.23
Dchs1E9PVD3 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Dchs1E9PVD3 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Dchs1E9PVD3 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Dchs1E9PVD3 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Dchs1E9PVD3 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Dchs1E9PVD3 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Dchs1E9PVD3 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Dchs1E9PVD3 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Dchs1E9PVD3 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Dchs1E9PVD3 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.6□□□□□ -0.23
Dchs1E9PVD3 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Dchs1E9PVD3 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Dchs1E9PVD3 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Dchs1E9PVD3 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Dchs1E9PVD3 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Dchs1E9PVD3 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Dchs1E9PVD3 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Dchs1E9PVD3 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Dchs1E9PVD3 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Dchs1E9PVD3 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Dchs1E9PVD3 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.59□□□□□ -0.23
Dchs1E9PVD3 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC13.59□□□□□ -0.23
Dchs1E9PVD3 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Dchs1E9PVD3 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.59□□□□□ -0.23
Dchs1E9PVD3 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Dchs1E9PVD3 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Dchs1E9PVD3 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms