Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clrn2B2RVW2 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Clrn2B2RVW2 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Clrn2B2RVW2 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Clrn2B2RVW2 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clrn2B2RVW2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Clrn2B2RVW2 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Clrn2B2RVW2 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.92■□□□□ 0.46
Clrn2B2RVW2 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.92■□□□□ 0.46
Clrn2B2RVW2 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clrn2B2RVW2 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Clrn2B2RVW2 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.92■□□□□ 0.46
Clrn2B2RVW2 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Clrn2B2RVW2 Gm7774-201ENSMUST00000200064 533 ntBASIC17.92■□□□□ 0.46
Clrn2B2RVW2 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.92■□□□□ 0.46
Clrn2B2RVW2 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clrn2B2RVW2 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clrn2B2RVW2 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clrn2B2RVW2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clrn2B2RVW2 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.92■□□□□ 0.46
Clrn2B2RVW2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clrn2B2RVW2 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clrn2B2RVW2 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clrn2B2RVW2 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Clrn2B2RVW2 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clrn2B2RVW2 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clrn2B2RVW2 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clrn2B2RVW2 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Clrn2B2RVW2 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Clrn2B2RVW2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clrn2B2RVW2 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Clrn2B2RVW2 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clrn2B2RVW2 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clrn2B2RVW2 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.91■□□□□ 0.46
Clrn2B2RVW2 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.91■□□□□ 0.46
Clrn2B2RVW2 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.91■□□□□ 0.46
Clrn2B2RVW2 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.91■□□□□ 0.46
Clrn2B2RVW2 Gm10154-201ENSMUST00000084445 354 ntBASIC17.91■□□□□ 0.46
Clrn2B2RVW2 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clrn2B2RVW2 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Clrn2B2RVW2 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.91■□□□□ 0.46
Clrn2B2RVW2 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clrn2B2RVW2 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clrn2B2RVW2 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clrn2B2RVW2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clrn2B2RVW2 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clrn2B2RVW2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.91■□□□□ 0.46
Clrn2B2RVW2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Clrn2B2RVW2 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Clrn2B2RVW2 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clrn2B2RVW2 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clrn2B2RVW2 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Clrn2B2RVW2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clrn2B2RVW2 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Clrn2B2RVW2 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.9■□□□□ 0.46
Clrn2B2RVW2 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clrn2B2RVW2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.9■□□□□ 0.46
Clrn2B2RVW2 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clrn2B2RVW2 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Clrn2B2RVW2 Mir7023-201ENSMUST00000185093 64 ntBASIC17.9■□□□□ 0.46
Clrn2B2RVW2 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.9■□□□□ 0.46
Clrn2B2RVW2 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.9■□□□□ 0.46
Clrn2B2RVW2 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Clrn2B2RVW2 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clrn2B2RVW2 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clrn2B2RVW2 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clrn2B2RVW2 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clrn2B2RVW2 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.9■□□□□ 0.46
Clrn2B2RVW2 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clrn2B2RVW2 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clrn2B2RVW2 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Clrn2B2RVW2 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Clrn2B2RVW2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Clrn2B2RVW2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clrn2B2RVW2 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clrn2B2RVW2 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.89■□□□□ 0.45
Clrn2B2RVW2 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clrn2B2RVW2 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
Clrn2B2RVW2 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Clrn2B2RVW2 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Clrn2B2RVW2 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clrn2B2RVW2 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.89■□□□□ 0.45
Clrn2B2RVW2 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clrn2B2RVW2 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clrn2B2RVW2 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.89■□□□□ 0.45
Clrn2B2RVW2 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Clrn2B2RVW2 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Clrn2B2RVW2 Gm18057-201ENSMUST00000208220 503 ntBASIC17.89■□□□□ 0.45
Clrn2B2RVW2 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.89■□□□□ 0.45
Clrn2B2RVW2 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.89■□□□□ 0.45
Clrn2B2RVW2 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clrn2B2RVW2 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Clrn2B2RVW2 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clrn2B2RVW2 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Clrn2B2RVW2 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.89■□□□□ 0.45
Clrn2B2RVW2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clrn2B2RVW2 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Clrn2B2RVW2 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clrn2B2RVW2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clrn2B2RVW2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms