Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.16■□□□□ 0.34
Krt28A6BLY7 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.16■□□□□ 0.34
Krt28A6BLY7 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.16■□□□□ 0.34
Krt28A6BLY7 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Krt28A6BLY7 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Krt28A6BLY7 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Krt28A6BLY7 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Krt28A6BLY7 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Krt28A6BLY7 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Krt28A6BLY7 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Krt28A6BLY7 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.15■□□□□ 0.34
Krt28A6BLY7 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Krt28A6BLY7 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Krt28A6BLY7 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Krt28A6BLY7 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Krt28A6BLY7 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Krt28A6BLY7 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Krt28A6BLY7 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Krt28A6BLY7 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Krt28A6BLY7 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Krt28A6BLY7 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC17.15■□□□□ 0.34
Krt28A6BLY7 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.15■□□□□ 0.34
Krt28A6BLY7 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Krt28A6BLY7 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Krt28A6BLY7 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.15■□□□□ 0.34
Krt28A6BLY7 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Krt28A6BLY7 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Krt28A6BLY7 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Krt28A6BLY7 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Krt28A6BLY7 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Krt28A6BLY7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Krt28A6BLY7 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Krt28A6BLY7 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Krt28A6BLY7 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.14■□□□□ 0.33
Krt28A6BLY7 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Krt28A6BLY7 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Krt28A6BLY7 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Krt28A6BLY7 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Krt28A6BLY7 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Krt28A6BLY7 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Krt28A6BLY7 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Krt28A6BLY7 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.14■□□□□ 0.33
Krt28A6BLY7 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Krt28A6BLY7 Gm10499-201ENSMUST00000174094 934 ntBASIC17.14■□□□□ 0.33
Krt28A6BLY7 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Krt28A6BLY7 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Krt28A6BLY7 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.14■□□□□ 0.33
Krt28A6BLY7 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Krt28A6BLY7 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.14■□□□□ 0.33
Krt28A6BLY7 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.14■□□□□ 0.33
Krt28A6BLY7 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Krt28A6BLY7 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.14■□□□□ 0.33
Krt28A6BLY7 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Krt28A6BLY7 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Krt28A6BLY7 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Krt28A6BLY7 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.13■□□□□ 0.33
Krt28A6BLY7 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.13■□□□□ 0.33
Krt28A6BLY7 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Krt28A6BLY7 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Krt28A6BLY7 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Krt28A6BLY7 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Krt28A6BLY7 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Krt28A6BLY7 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Krt28A6BLY7 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Krt28A6BLY7 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Krt28A6BLY7 Gm18187-201ENSMUST00000196476 984 ntBASIC17.13■□□□□ 0.33
Krt28A6BLY7 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.13■□□□□ 0.33
Krt28A6BLY7 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Krt28A6BLY7 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Krt28A6BLY7 Syt7-205ENSMUST00000224135 1557 ntBASIC17.13■□□□□ 0.33
Krt28A6BLY7 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Krt28A6BLY7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Krt28A6BLY7 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Krt28A6BLY7 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Krt28A6BLY7 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Krt28A6BLY7 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Krt28A6BLY7 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Krt28A6BLY7 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Krt28A6BLY7 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Krt28A6BLY7 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Krt28A6BLY7 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Krt28A6BLY7 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Krt28A6BLY7 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.12■□□□□ 0.33
Krt28A6BLY7 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Krt28A6BLY7 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC17.12■□□□□ 0.33
Krt28A6BLY7 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Krt28A6BLY7 Gm25144-201ENSMUST00000179561 110 ntBASIC17.12■□□□□ 0.33
Krt28A6BLY7 Gm25352-201ENSMUST00000179815 110 ntBASIC17.12■□□□□ 0.33
Krt28A6BLY7 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Krt28A6BLY7 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Krt28A6BLY7 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.12■□□□□ 0.33
Krt28A6BLY7 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Krt28A6BLY7 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Krt28A6BLY7 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Krt28A6BLY7 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Krt28A6BLY7 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Krt28A6BLY7 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Krt28A6BLY7 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Krt28A6BLY7 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Krt28A6BLY7 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms