Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm3854A0A1B0GSS6 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm3854A0A1B0GSS6 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Gm3854A0A1B0GSS6 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Gm3854A0A1B0GSS6 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
Gm3854A0A1B0GSS6 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Gm3854A0A1B0GSS6 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm3854A0A1B0GSS6 AA543401-201ENSMUST00000164248 1269 ntBASIC15.49■□□□□ 0.07
Gm3854A0A1B0GSS6 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Gm3854A0A1B0GSS6 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
Gm3854A0A1B0GSS6 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm3854A0A1B0GSS6 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Gm3854A0A1B0GSS6 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm3854A0A1B0GSS6 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Gm3854A0A1B0GSS6 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm3854A0A1B0GSS6 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm3854A0A1B0GSS6 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Gm3854A0A1B0GSS6 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Gm3854A0A1B0GSS6 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm3854A0A1B0GSS6 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm3854A0A1B0GSS6 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm3854A0A1B0GSS6 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Gm3854A0A1B0GSS6 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm3854A0A1B0GSS6 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm3854A0A1B0GSS6 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm3854A0A1B0GSS6 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm3854A0A1B0GSS6 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Gm3854A0A1B0GSS6 Rprl2-201ENSMUST00000157150 290 ntBASIC15.48■□□□□ 0.07
Gm3854A0A1B0GSS6 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm3854A0A1B0GSS6 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.48■□□□□ 0.07
Gm3854A0A1B0GSS6 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.48■□□□□ 0.07
Gm3854A0A1B0GSS6 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.48■□□□□ 0.07
Gm3854A0A1B0GSS6 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm3854A0A1B0GSS6 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm3854A0A1B0GSS6 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm3854A0A1B0GSS6 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm3854A0A1B0GSS6 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm3854A0A1B0GSS6 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm3854A0A1B0GSS6 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm3854A0A1B0GSS6 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.48■□□□□ 0.07
Gm3854A0A1B0GSS6 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm3854A0A1B0GSS6 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm3854A0A1B0GSS6 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm3854A0A1B0GSS6 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm3854A0A1B0GSS6 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Gm3854A0A1B0GSS6 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm3854A0A1B0GSS6 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm3854A0A1B0GSS6 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm3854A0A1B0GSS6 Gm12008-201ENSMUST00000117791 755 ntBASIC15.47■□□□□ 0.07
Gm3854A0A1B0GSS6 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.47■□□□□ 0.07
Gm3854A0A1B0GSS6 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm3854A0A1B0GSS6 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.47■□□□□ 0.07
Gm3854A0A1B0GSS6 Gm20553-201ENSMUST00000204205 844 ntBASIC15.47■□□□□ 0.07
Gm3854A0A1B0GSS6 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.47■□□□□ 0.07
Gm3854A0A1B0GSS6 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.47■□□□□ 0.07
Gm3854A0A1B0GSS6 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm3854A0A1B0GSS6 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.47■□□□□ 0.07
Gm3854A0A1B0GSS6 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm3854A0A1B0GSS6 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Gm3854A0A1B0GSS6 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.47■□□□□ 0.07
Gm3854A0A1B0GSS6 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm3854A0A1B0GSS6 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm3854A0A1B0GSS6 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm3854A0A1B0GSS6 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm3854A0A1B0GSS6 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.47■□□□□ 0.07
Gm3854A0A1B0GSS6 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm3854A0A1B0GSS6 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm3854A0A1B0GSS6 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm3854A0A1B0GSS6 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm3854A0A1B0GSS6 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm3854A0A1B0GSS6 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm3854A0A1B0GSS6 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm3854A0A1B0GSS6 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Gm3854A0A1B0GSS6 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm3854A0A1B0GSS6 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm3854A0A1B0GSS6 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm3854A0A1B0GSS6 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Gm3854A0A1B0GSS6 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Gm3854A0A1B0GSS6 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm3854A0A1B0GSS6 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.46■□□□□ 0.07
Gm3854A0A1B0GSS6 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm3854A0A1B0GSS6 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Gm3854A0A1B0GSS6 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Gm3854A0A1B0GSS6 Gm9385-201ENSMUST00000117563 472 ntBASIC15.46■□□□□ 0.07
Gm3854A0A1B0GSS6 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC15.46■□□□□ 0.07
Gm3854A0A1B0GSS6 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.46■□□□□ 0.07
Gm3854A0A1B0GSS6 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Gm3854A0A1B0GSS6 Gm8318-201ENSMUST00000182954 872 ntBASIC15.46■□□□□ 0.07
Gm3854A0A1B0GSS6 Mir6990-201ENSMUST00000183724 91 ntBASIC15.46■□□□□ 0.07
Gm3854A0A1B0GSS6 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Gm3854A0A1B0GSS6 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.46■□□□□ 0.07
Gm3854A0A1B0GSS6 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.46■□□□□ 0.07
Gm3854A0A1B0GSS6 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm3854A0A1B0GSS6 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm3854A0A1B0GSS6 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm3854A0A1B0GSS6 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm3854A0A1B0GSS6 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm3854A0A1B0GSS6 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Gm3854A0A1B0GSS6 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm3854A0A1B0GSS6 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms