Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13n-4A0A0G2JG01 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
Trav13n-4A0A0G2JG01 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13n-4A0A0G2JG01 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav13n-4A0A0G2JG01 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13n-4A0A0G2JG01 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13n-4A0A0G2JG01 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav13n-4A0A0G2JG01 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13n-4A0A0G2JG01 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13n-4A0A0G2JG01 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav13n-4A0A0G2JG01 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13n-4A0A0G2JG01 Gm15372-201ENSMUST00000120729 834 ntBASIC12.62□□□□□ -0.39
Trav13n-4A0A0G2JG01 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13n-4A0A0G2JG01 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13n-4A0A0G2JG01 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13n-4A0A0G2JG01 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13n-4A0A0G2JG01 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.62□□□□□ -0.39
Trav13n-4A0A0G2JG01 Gm29707-201ENSMUST00000196325 491 ntBASIC12.62□□□□□ -0.39
Trav13n-4A0A0G2JG01 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav13n-4A0A0G2JG01 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav13n-4A0A0G2JG01 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13n-4A0A0G2JG01 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13n-4A0A0G2JG01 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav13n-4A0A0G2JG01 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13n-4A0A0G2JG01 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13n-4A0A0G2JG01 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13n-4A0A0G2JG01 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13n-4A0A0G2JG01 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13n-4A0A0G2JG01 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav13n-4A0A0G2JG01 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13n-4A0A0G2JG01 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 Rps4l-201ENSMUST00000071745 943 ntBASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-4A0A0G2JG01 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-4A0A0G2JG01 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-4A0A0G2JG01 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-4A0A0G2JG01 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-4A0A0G2JG01 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-4A0A0G2JG01 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-4A0A0G2JG01 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.6□□□□□ -0.39
Trav13n-4A0A0G2JG01 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-4A0A0G2JG01 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-4A0A0G2JG01 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-4A0A0G2JG01 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-4A0A0G2JG01 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-4A0A0G2JG01 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-4A0A0G2JG01 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-4A0A0G2JG01 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav13n-4A0A0G2JG01 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.6□□□□□ -0.39
Trav13n-4A0A0G2JG01 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-4A0A0G2JG01 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav13n-4A0A0G2JG01 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-4A0A0G2JG01 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-4A0A0G2JG01 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trav13n-4A0A0G2JG01 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-4A0A0G2JG01 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-4A0A0G2JG01 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-4A0A0G2JG01 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-4A0A0G2JG01 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-4A0A0G2JG01 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-4A0A0G2JG01 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-4A0A0G2JG01 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-4A0A0G2JG01 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms