Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Gm6858-201ENSMUST00000208582 1468 ntBASIC11.27□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC11.27□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Gm12497-201ENSMUST00000138778 237 ntBASIC11.27□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC11.27□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Gm6296-201ENSMUST00000222599 943 ntBASIC11.27□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13n-1A0A0G2JEU8 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Gm9172-201ENSMUST00000212092 954 ntBASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Gm43072-201ENSMUST00000200283 1671 ntBASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 AC132265.1-201ENSMUST00000219233 1665 ntBASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Gm4459-201ENSMUST00000118750 468 ntBASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms