Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-5A0A075B6B5 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-5A0A075B6B5 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-5A0A075B6B5 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-5A0A075B6B5 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-5A0A075B6B5 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-5A0A075B6B5 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-5A0A075B6B5 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-5A0A075B6B5 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav6-5A0A075B6B5 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-5A0A075B6B5 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav6-5A0A075B6B5 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-5A0A075B6B5 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-5A0A075B6B5 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-5A0A075B6B5 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-5A0A075B6B5 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-5A0A075B6B5 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-5A0A075B6B5 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-5A0A075B6B5 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-5A0A075B6B5 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-5A0A075B6B5 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav6-5A0A075B6B5 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.04□□□□□ -0.48
Trav6-5A0A075B6B5 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-5A0A075B6B5 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-5A0A075B6B5 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-5A0A075B6B5 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.04□□□□□ -0.48
Trav6-5A0A075B6B5 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-5A0A075B6B5 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-5A0A075B6B5 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-5A0A075B6B5 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-5A0A075B6B5 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-5A0A075B6B5 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-5A0A075B6B5 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-5A0A075B6B5 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-5A0A075B6B5 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav6-5A0A075B6B5 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-5A0A075B6B5 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav6-5A0A075B6B5 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-5A0A075B6B5 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.04□□□□□ -0.48
Trav6-5A0A075B6B5 Timm23-208ENSMUST00000226683 750 ntBASIC12.04□□□□□ -0.48
Trav6-5A0A075B6B5 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav6-5A0A075B6B5 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-5A0A075B6B5 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-5A0A075B6B5 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-5A0A075B6B5 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-5A0A075B6B5 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-5A0A075B6B5 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-5A0A075B6B5 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-5A0A075B6B5 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-5A0A075B6B5 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav6-5A0A075B6B5 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-5A0A075B6B5 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-5A0A075B6B5 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav6-5A0A075B6B5 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-5A0A075B6B5 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-5A0A075B6B5 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-5A0A075B6B5 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-5A0A075B6B5 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-5A0A075B6B5 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-5A0A075B6B5 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-5A0A075B6B5 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-5A0A075B6B5 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav6-5A0A075B6B5 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-5A0A075B6B5 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-5A0A075B6B5 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-5A0A075B6B5 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav6-5A0A075B6B5 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Trav6-5A0A075B6B5 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-5A0A075B6B5 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-5A0A075B6B5 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-5A0A075B6B5 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-5A0A075B6B5 Gm11336-201ENSMUST00000118168 334 ntBASIC12.03□□□□□ -0.48
Trav6-5A0A075B6B5 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-5A0A075B6B5 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.03□□□□□ -0.48
Trav6-5A0A075B6B5 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-5A0A075B6B5 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-5A0A075B6B5 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-5A0A075B6B5 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-5A0A075B6B5 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Trav6-5A0A075B6B5 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav6-5A0A075B6B5 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-5A0A075B6B5 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav6-5A0A075B6B5 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav6-5A0A075B6B5 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Trav6-5A0A075B6B5 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav6-5A0A075B6B5 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-5A0A075B6B5 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6-5A0A075B6B5 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.02□□□□□ -0.48
Trav6-5A0A075B6B5 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6-5A0A075B6B5 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6-5A0A075B6B5 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6-5A0A075B6B5 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6-5A0A075B6B5 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6-5A0A075B6B5 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Trav6-5A0A075B6B5 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6-5A0A075B6B5 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-5A0A075B6B5 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.02□□□□□ -0.49
Trav6-5A0A075B6B5 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav6-5A0A075B6B5 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.02□□□□□ -0.49
Trav6-5A0A075B6B5 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms