Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-4A0A075B6B4 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-4A0A075B6B4 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-4A0A075B6B4 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-4A0A075B6B4 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-4A0A075B6B4 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-4A0A075B6B4 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-4A0A075B6B4 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-4A0A075B6B4 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-4A0A075B6B4 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-4A0A075B6B4 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-4A0A075B6B4 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-4A0A075B6B4 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-4A0A075B6B4 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-4A0A075B6B4 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-4A0A075B6B4 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav6-4A0A075B6B4 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-4A0A075B6B4 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-4A0A075B6B4 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-4A0A075B6B4 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-4A0A075B6B4 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-4A0A075B6B4 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-4A0A075B6B4 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trav6-4A0A075B6B4 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-4A0A075B6B4 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-4A0A075B6B4 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trav6-4A0A075B6B4 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-4A0A075B6B4 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-4A0A075B6B4 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-4A0A075B6B4 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Trav6-4A0A075B6B4 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC11.96□□□□□ -0.49
Trav6-4A0A075B6B4 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav6-4A0A075B6B4 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-4A0A075B6B4 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trav6-4A0A075B6B4 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trav6-4A0A075B6B4 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trav6-4A0A075B6B4 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Trav6-4A0A075B6B4 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6-4A0A075B6B4 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6-4A0A075B6B4 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6-4A0A075B6B4 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6-4A0A075B6B4 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6-4A0A075B6B4 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Trav6-4A0A075B6B4 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Trav6-4A0A075B6B4 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6-4A0A075B6B4 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6-4A0A075B6B4 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6-4A0A075B6B4 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-4A0A075B6B4 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-4A0A075B6B4 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-4A0A075B6B4 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-4A0A075B6B4 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav6-4A0A075B6B4 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-4A0A075B6B4 App-207ENSMUST00000227737 2827 ntBASIC11.95□□□□□ -0.5
Trav6-4A0A075B6B4 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav6-4A0A075B6B4 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-4A0A075B6B4 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-4A0A075B6B4 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-4A0A075B6B4 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav6-4A0A075B6B4 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-4A0A075B6B4 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-4A0A075B6B4 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav6-4A0A075B6B4 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav6-4A0A075B6B4 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-4A0A075B6B4 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-4A0A075B6B4 Gm4535-201ENSMUST00000182274 558 ntBASIC11.95□□□□□ -0.5
Trav6-4A0A075B6B4 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-4A0A075B6B4 Gm10355-201ENSMUST00000097146 517 ntBASIC11.95□□□□□ -0.5
Trav6-4A0A075B6B4 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-4A0A075B6B4 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-4A0A075B6B4 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav6-4A0A075B6B4 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-4A0A075B6B4 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-4A0A075B6B4 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-4A0A075B6B4 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-4A0A075B6B4 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-4A0A075B6B4 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-4A0A075B6B4 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-4A0A075B6B4 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-4A0A075B6B4 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-4A0A075B6B4 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-4A0A075B6B4 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-4A0A075B6B4 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-4A0A075B6B4 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-4A0A075B6B4 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6-4A0A075B6B4 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav6-4A0A075B6B4 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-4A0A075B6B4 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-4A0A075B6B4 Dancr-204ENSMUST00000132389 2347 ntBASIC11.94□□□□□ -0.5
Trav6-4A0A075B6B4 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC11.94□□□□□ -0.5
Trav6-4A0A075B6B4 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav6-4A0A075B6B4 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav6-4A0A075B6B4 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC11.94□□□□□ -0.5
Trav6-4A0A075B6B4 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-4A0A075B6B4 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-4A0A075B6B4 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-4A0A075B6B4 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-4A0A075B6B4 Gm7669-201ENSMUST00000210184 1603 ntBASIC11.94□□□□□ -0.5
Trav6-4A0A075B6B4 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-4A0A075B6B4 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms